RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 RIT2Q99578 217 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 ZNF577Q9BSK1 485 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 GDPD2Q9HCC8 539 aa12.6□□□□□ -0.39
VCP-204ENST00000466100 ZHX1Q9UKY1 873 aaPredicted RBP12.6□□□□□ -0.39
VCP-204ENST00000466100 LOXHD1Q8IVV2 1947 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 POTEFA5A3E0 1075 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 INHAP05111 366 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
VCP-204ENST00000466100 PTGS1P23219 599 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 GRK4P32298 578 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.394e-7■□□□□ 8.9
VCP-204ENST00000466100 PPP2R5CQ13362 524 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 TTLL4Q14679 1199 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 LY6KQ17RY6 165 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 DUSP28Q4G0W2 176 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 LRCH2Q5VUJ6 765 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 SLFN12Q8IYM2 578 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 IGSF22Q8N9C0 903 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 FERMT2Q96AC1 680 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 TTC12Q9H892 705 aaPredicted RBP12.59□□□□□ -0.39
VCP-204ENST00000466100 PKD2L1Q9P0L9 805 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 GNEQ9Y223 722 aaKnown RBP12.59□□□□□ -0.39
VCP-204ENST00000466100 SRPRBQ9Y5M8 271 aaKnown RBP12.59□□□□□ -0.39
VCP-204ENST00000466100 ARID2Q68CP9 1835 aa12.59□□□□□ -0.39
VCP-204ENST00000466100 GAS7O60861 476 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 FARP2O94887 1054 aaPredicted RBP12.58□□□□□ -0.4
VCP-204ENST00000466100 CCNE2O96020 404 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 TXNP10599 105 aaKnown RBP12.58□□□□□ -0.4
VCP-204ENST00000466100 SMPD1P17405 629 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 TXKP42681 527 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 ARHGAP1Q07960 439 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
VCP-204ENST00000466100 GJC2Q5T442 439 aaPredicted RBP12.58□□□□□ -0.4
VCP-204ENST00000466100 IQSEC1Q6DN90 963 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 DTHD1Q6ZMT9 781 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
VCP-204ENST00000466100 COPS5Q92905 334 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
VCP-204ENST00000466100 UNC45AQ9H3U1 944 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 PRDM10Q9NQV6 1147 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 TBC1D22BQ9NU19 505 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 PCDHA7Q9UN72 937 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 TELO2Q9Y4R8 837 aa12.58□□□□□ -0.4
VCP-204ENST00000466100 MKI67P46013 3256 aaKnown RBP12.57□□□□□ -0.4
VCP-204ENST00000466100 VWA3AA6NCI4 1184 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 POTEMA6NI47 508 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 EML1O00423 815 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
VCP-204ENST00000466100 SEPT4O43236 478 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 CUTAO60888 179 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 GGPS1O95749 300 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 AKR1A1P14550 325 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 CCND3P30281 292 aaPredicted RBP12.57□□□□□ -0.4
VCP-204ENST00000466100 NEDD9Q14511 834 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 ZNF746Q6NUN9 644 aaPredicted RBP12.57□□□□□ -0.4
VCP-204ENST00000466100 FBXO46Q6PJ61 603 aaPredicted RBP12.57□□□□□ -0.4
VCP-204ENST00000466100 METTL7BQ6UX53 244 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 CYFIP1Q7L576 1253 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 GIMAP8Q8ND71 665 aaPredicted RBP12.57□□□□□ -0.4
VCP-204ENST00000466100 SH3TC2Q8TF17 1288 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 LENG1Q96BZ8 264 aaPredicted RBP12.57□□□□□ -0.4
VCP-204ENST00000466100 CLIC6Q96NY7 704 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 GBP4Q96PP9 640 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 TEKT3Q9BXF9 490 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 CSRNP2Q9H175 543 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 JPH1Q9HDC5 661 aaPredicted RBP12.57□□□□□ -0.4
VCP-204ENST00000466100 FAM184BQ9ULE4 1060 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 PCDHA12Q9UN75 941 aa12.57□□□□□ -0.4
VCP-204ENST00000466100 SCN10AQ9Y5Y9 1956 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 KIAA0100Q14667 2235 aaKnown RBP12.56□□□□□ -0.4
VCP-204ENST00000466100 HOXD8P13378 290 aaPredicted RBP12.56□□□□□ -0.4
VCP-204ENST00000466100 LONP1P36776 959 aaKnown RBP12.56□□□□□ -0.4
VCP-204ENST00000466100 TECP42680 631 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 ME1P48163 572 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 KRT76Q01546 638 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 PDIA5Q14554 519 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 PKN2Q16513 984 aaKnown RBP12.56□□□□□ -0.4
VCP-204ENST00000466100 TMEM266Q2M3C6 531 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 SHC4Q6S5L8 630 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
VCP-204ENST00000466100 SDF4Q9BRK5 362 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
VCP-204ENST00000466100 SLC9A2Q9UBY0 812 aa12.56□□□□□ -0.4
VCP-204ENST00000466100 PP2D1A8MPX8 630 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 DDX39AO00148 427 aaKnown RBP12.55□□□□□ -0.4
VCP-204ENST00000466100 CTAGE5O15320 804 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 MARCH6O60337 910 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 SORBS3O60504 671 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 DUSP11O75319 330 aaKnown RBP12.55□□□□□ -0.4
VCP-204ENST00000466100 ATG7O95352 703 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 GH1P01241 217 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 ACTR2P61160 394 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 NKX3-2P78367 333 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 SLC9C1Q4G0N8 1177 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 ADALQ6DHV7 355 aa12.55□□□□□ -0.4
VCP-204ENST00000466100 ABHD15Q6UXT9 468 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms