RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 MEIS1O00470 390 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 KIAA0355O15063 1070 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 ARP10275 920 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 ITGB8P26012 769 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 CEP55Q53EZ4 464 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 BLIDQ8IZY5 108 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 PHF20Q9BVI0 1012 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 KCNH7Q9NS40 1196 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 PRKAG2Q9UGJ0 569 aa29.56■■■□□ 2.32
SMC4-206ENST00000465903 FAM86B1E9PN63 330 aa29.55■■■□□ 2.32
SMC4-206ENST00000465903 JAK2O60674 1132 aa29.55■■■□□ 2.32
SMC4-206ENST00000465903 FAM86B2P0C5J1 330 aa29.55■■■□□ 2.32
SMC4-206ENST00000465903 ZSCAN31Q96LW9 406 aaPredicted RBP29.55■■■□□ 2.32
SMC4-206ENST00000465903 GPR20Q99678 358 aa29.55■■■□□ 2.32
SMC4-206ENST00000465903 TMEM39AQ9NV64 488 aa29.55■■■□□ 2.32
SMC4-206ENST00000465903 TBX21Q9UL17 535 aa29.55■■■□□ 2.32
SMC4-206ENST00000465903 MDM2Q00987 491 aaPredicted RBP29.54■■■□□ 2.32
SMC4-206ENST00000465903 GALNT17Q6IS24 598 aa29.54■■■□□ 2.32
SMC4-206ENST00000465903 GIMAP8Q8ND71 665 aaPredicted RBP29.54■■■□□ 2.32
SMC4-206ENST00000465903 TRPV6Q9H1D0 765 aa29.54■■■□□ 2.32
SMC4-206ENST00000465903 PKD2L1Q9P0L9 805 aa29.54■■■□□ 2.32
SMC4-206ENST00000465903 TRIOBPQ9H2D6 2365 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 IGLV3-22A0A075B6J6 115 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 HAS3O00219 553 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 B4GALT4O60513 344 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 ZNF286BP0CG31 522 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 ZNF76P36508 570 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 NFRKBQ6P4R8 1299 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 NIPA1Q7RTP0 329 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 CCDC83Q8IWF9 413 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 C16orf70Q9BSU1 422 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 ALG1Q9BT22 464 aa29.53■■■□□ 2.32
SMC4-206ENST00000465903 TLR3O15455 904 aaKnown RBP29.52■■■□□ 2.32
SMC4-206ENST00000465903 F2P00734 622 aa29.52■■■□□ 2.32
SMC4-206ENST00000465903 CIITAP33076 1130 aa29.52■■■□□ 2.32
SMC4-206ENST00000465903 BMP8BP34820 402 aa29.52■■■□□ 2.32
SMC4-206ENST00000465903 PSEN2P49810 448 aa29.52■■■□□ 2.32
SMC4-206ENST00000465903 WASF1Q92558 559 aa29.52■■■□□ 2.32
SMC4-206ENST00000465903 AGO4Q9HCK5 861 aaKnown RBP29.52■■■□□ 2.32
SMC4-206ENST00000465903 KAT6AQ92794 2004 aa29.51■■■□□ 2.31
SMC4-206ENST00000465903 PTPN11Q06124 597 aaPredicted RBP29.51■■■□□ 2.31
SMC4-206ENST00000465903 BADQ92934 168 aa29.51■■■□□ 2.31
SMC4-206ENST00000465903 GSTTP1A0A1W2PQM5 241 aa29.5■■■□□ 2.31
SMC4-206ENST00000465903 NOP56O00567 594 aaKnown RBP29.5■■■□□ 2.31
SMC4-206ENST00000465903 LGALS2P05162 132 aa29.5■■■□□ 2.31
SMC4-206ENST00000465903 CHMP4BP1P59074 171 aa29.5■■■□□ 2.31
SMC4-206ENST00000465903 MFSD10Q14728 455 aa29.5■■■□□ 2.31
SMC4-206ENST00000465903 FAM47CQ5HY64 1035 aa29.5■■■□□ 2.31
SMC4-206ENST00000465903 PLA2G4DQ86XP0 818 aa29.5■■■□□ 2.31
SMC4-206ENST00000465903 SH2B1Q9NRF2 756 aaPredicted RBP29.5■■■□□ 2.31
SMC4-206ENST00000465903 TRMT13Q9NUP7 481 aaKnown RBP29.5■■■□□ 2.31
SMC4-206ENST00000465903 NFASCO94856 1347 aa29.49■■■□□ 2.31
SMC4-206ENST00000465903 CD2BP2O95400 341 aaKnown RBP29.49■■■□□ 2.31
SMC4-206ENST00000465903 XBP1P17861 261 aa29.49■■■□□ 2.31
SMC4-206ENST00000465903 USP11P51784 963 aa29.49■■■□□ 2.31
SMC4-206ENST00000465903 SP4Q02446 784 aa29.49■■■□□ 2.31
SMC4-206ENST00000465903 ITGB3BPQ13352 177 aaPredicted RBP29.49■■■□□ 2.31
SMC4-206ENST00000465903 KIAA0753Q2KHM9 967 aa29.49■■■□□ 2.31
SMC4-206ENST00000465903 SESTD1Q86VW0 696 aa29.49■■■□□ 2.31
SMC4-206ENST00000465903 TBCKQ8TEA7 893 aa29.49■■■□□ 2.31
SMC4-206ENST00000465903 LBHD1Q9BQE6 289 aaPredicted RBP29.49■■■□□ 2.31
SMC4-206ENST00000465903 RANBP2P49792 3224 aaKnown RBP29.49■■■□□ 2.31
SMC4-206ENST00000465903 WDR81Q562E7 1941 aa29.48■■■□□ 2.31
SMC4-206ENST00000465903 ST18O60284 1047 aa29.48■■■□□ 2.31
SMC4-206ENST00000465903 TIMP1P01033 207 aa29.48■■■□□ 2.31
SMC4-206ENST00000465903 RAG1P15918 1043 aa29.48■■■□□ 2.31
SMC4-206ENST00000465903 IL27Q8NEV9 243 aa29.48■■■□□ 2.31
SMC4-206ENST00000465903 OXER1Q8TDS5 423 aa29.48■■■□□ 2.31
SMC4-206ENST00000465903 LLPHQ9BRT6 129 aaKnown RBP29.48■■■□□ 2.31
SMC4-206ENST00000465903 KATNAL1Q9BW62 490 aa29.48■■■□□ 2.31
SMC4-206ENST00000465903 SEPT1Q8WYJ6 367 aa29.47■■■□□ 2.31
SMC4-206ENST00000465903 LENG9Q96B70 501 aa29.47■■■□□ 2.31
SMC4-206ENST00000465903 HDAC6Q9UBN7 1215 aa29.47■■■□□ 2.31
SMC4-206ENST00000465903 H3BRB1 525 aa29.46■■■□□ 2.31
SMC4-206ENST00000465903 DHX15O43143 795 aaKnown RBP29.46■■■□□ 2.31
SMC4-206ENST00000465903 TCF7P36402 384 aaPredicted RBP29.46■■■□□ 2.31
SMC4-206ENST00000465903 HABP4Q5JVS0 413 aaKnown RBP29.46■■■□□ 2.31
SMC4-206ENST00000465903 UTP14CQ5TAP6 766 aaKnown RBP29.46■■■□□ 2.31
SMC4-206ENST00000465903 GDF6Q6KF10 455 aaPredicted RBP29.46■■■□□ 2.31
SMC4-206ENST00000465903 CTAGE1Q96RT6 745 aa29.46■■■□□ 2.31
SMC4-206ENST00000465903 TUT1Q9H6E5 874 aaKnown RBP29.46■■■□□ 2.31
SMC4-206ENST00000465903 SLC9A2Q9UBY0 812 aa29.46■■■□□ 2.31
SMC4-206ENST00000465903 PRR16Q569H4 304 aa29.45■■■□□ 2.31
SMC4-206ENST00000465903 KRT25Q7Z3Z0 450 aa29.45■■■□□ 2.31
SMC4-206ENST00000465903 TRIM50Q86XT4 487 aa29.45■■■□□ 2.31
SMC4-206ENST00000465903 UIMC1Q96RL1 719 aa29.45■■■□□ 2.31
SMC4-206ENST00000465903 SDF4Q9BRK5 362 aa29.45■■■□□ 2.31
SMC4-206ENST00000465903 NOC4LQ9BVI4 516 aaKnown RBP29.45■■■□□ 2.31
SMC4-206ENST00000465903 PPP1R12CQ9BZL4 782 aa29.45■■■□□ 2.31
SMC4-206ENST00000465903 UBE2OQ9C0C9 1292 aaKnown RBP29.45■■■□□ 2.31
SMC4-206ENST00000465903 JPH1Q9HDC5 661 aaPredicted RBP29.45■■■□□ 2.31
SMC4-206ENST00000465903 GTF2IRD1Q9UHL9 959 aa29.45■■■□□ 2.31
SMC4-206ENST00000465903 UMODL1Q5DID0 1318 aa29.45■■■□□ 2.3
SMC4-206ENST00000465903 SUPT20HL2P0C7V6 817 aa29.44■■■□□ 2.3
SMC4-206ENST00000465903 CYP2C9P11712 490 aa29.44■■■□□ 2.3
SMC4-206ENST00000465903 SETQ01105 290 aaPredicted RBP29.44■■■□□ 2.3
SMC4-206ENST00000465903 HIC1Q14526 733 aa29.44■■■□□ 2.3
SMC4-206ENST00000465903 NONOQ15233 471 aaKnown RBP eCLIP29.44■■■□□ 2.36e-8■□□□□ 8.6
SMC4-206ENST00000465903 CYP2C18P33260 490 aa29.43■■■□□ 2.3
SMC4-206ENST00000465903 INF2Q27J81 1249 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms