RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SLC12A3P55017 1021 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 ZNF662Q6ZS27 426 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 RRAGAQ7L523 313 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 FBXO11Q86XK2 927 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 CYP2W1Q8TAV3 490 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 BAP1Q92560 729 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 CCDC42Q96M95 316 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 ABCB11O95342 1321 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 FGFR1OPO95684 399 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 HNRNPH3P31942 346 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 ECE1P42892 770 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 CDK17Q00537 523 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 HERC4Q5GLZ8 1057 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 SYDE2Q5VT97 1194 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 SLC30A10Q6XR72 485 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 GMCL1P1Q8NEA9 526 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 SCFD1Q8WVM8 642 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 C7orf43Q8WVR3 580 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 GLT8D2Q9H1C3 349 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 SUGCTQ9HAC7 445 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 COL4A3BPQ9Y5P4 624 aa20.72■□□□□ 0.91
TSPAN4-210ENST00000464987 A0A0U1RQG5 324 aaPredicted RBP20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 FKBP3Q00688 224 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 APBA1Q02410 837 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 AP3B2Q13367 1082 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 KIAA1755Q5JYT7 1200 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 CAPZA3Q96KX2 299 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 CSRNP1Q96S65 589 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 MMS19Q96T76 1030 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 NAP1L4Q99733 375 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 ZHX3Q9H4I2 956 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 POLD4Q9HCU8 107 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 BMP2KQ9NSY1 1161 aaPredicted RBP20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 RAB21Q9UL25 225 aa20.71■□□□□ 0.91
TSPAN4-210ENST00000464987 BMP3P12645 472 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 EIF4A3P38919 411 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 CASP5P51878 434 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 VAV2P52735 878 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 VSNL1P62760 191 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 GMCL1Q96IK5 515 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 PURBQ96QR8 312 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 BCAS3Q9H6U6 928 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 RNF216Q9NWF9 866 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 ZNF185O15231 689 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 ATP8B1O43520 1251 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 NPM3O75607 178 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 IPO7O95373 1038 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 SPATA31C1P0DKV0 1188 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 KIF11P52732 1056 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 BRD3Q15059 726 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 CCDC40Q4G0X9 1142 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 RBM26Q5T8P6 1007 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 PAPD7Q5XG87 772 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 CCDC65Q8IXS2 484 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 SLFN12Q8IYM2 578 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 UBXN6Q9BZV1 441 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 KCTD10Q9H3F6 313 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 ZCCHC17Q9NP64 241 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 SAR1BQ9Y6B6 198 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 ATRNL1Q5VV63 1379 aa20.7■□□□□ 0.9
TSPAN4-210ENST00000464987 TCP10L2B9ZVM9 353 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 PABPC4Q13310 644 aaKnown RBP eCLIP20.69■□□□□ 0.93e-8■■■■■ 35.6
TSPAN4-210ENST00000464987 BEND6Q5SZJ8 279 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 ABCB6Q9NP58 842 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 NLRC4Q9NPP4 1024 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 SPDYE3A6NKU9 549 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 POLR3GO15318 223 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 MOXD1Q6UVY6 613 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 ZNF771Q7L3S4 317 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 CCDC84Q86UT8 332 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 CRACR2AQ9BSW2 395 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 MLXIPQ9HAP2 919 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 EMILIN3Q9NT22 766 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 PCDHA13Q9Y5I0 950 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 CAPN6Q9Y6Q1 641 aa20.69■□□□□ 0.9
TSPAN4-210ENST00000464987 CLRN2A0PK11 232 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 MSH4O15457 936 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 NOL4O94818 638 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 HMGB2P26583 209 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 SREBF1P36956 1147 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 CYP4A11Q02928 519 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 KIF5AQ12840 1032 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 Q4G0T1 1027 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 TBC1D5Q92609 795 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 PRR12Q9ULL5 1215 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 ATAD5Q96QE3 1844 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 FRMD3A2A2Y4 597 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 KRT18P05783 430 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 SPA17Q15506 151 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 NEK11Q8NG66 645 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 ACER1Q8TDN7 264 aa20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 IFIH1Q9BYX4 1025 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-210ENST00000464987 C21orf2O43822 256 aa20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 ENTPD3O75355 529 aa20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 MMP14P50281 582 aa20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 GIT2Q14161 759 aa20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 HAUS3Q68CZ6 603 aa20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 PDXDC1Q6P996 788 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms