RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 FERMT2Q96AC1 680 aa21.52■■□□□ 1.04
LMNB1-204ENST00000463908 SENP6Q9GZR1 1112 aaPredicted RBP21.52■■□□□ 1.04
LMNB1-204ENST00000463908 C11orf49Q9H6J7 331 aa21.52■■□□□ 1.04
LMNB1-204ENST00000463908 MLXIPQ9HAP2 919 aa21.52■■□□□ 1.04
LMNB1-204ENST00000463908 Q4G0T1 1027 aa21.51■■□□□ 1.03
LMNB1-204ENST00000463908 PPP4R3AQ6IN85 833 aa21.51■■□□□ 1.03
LMNB1-204ENST00000463908 MOXD1Q6UVY6 613 aa21.51■■□□□ 1.03
LMNB1-204ENST00000463908 METTL7BQ6UX53 244 aa21.51■■□□□ 1.03
LMNB1-204ENST00000463908 SPATA33Q96N06 139 aa21.51■■□□□ 1.03
LMNB1-204ENST00000463908 MOXD2PA6NHM9 499 aa21.5■■□□□ 1.03
LMNB1-204ENST00000463908 MSH4O15457 936 aa21.5■■□□□ 1.03
LMNB1-204ENST00000463908 MMP3P08254 477 aa21.5■■□□□ 1.03
LMNB1-204ENST00000463908 CPT1AP50416 773 aa21.5■■□□□ 1.03
LMNB1-204ENST00000463908 CXCL17Q6UXB2 119 aa21.5■■□□□ 1.03
LMNB1-204ENST00000463908 NOSTRINQ8IVI9 506 aa21.5■■□□□ 1.03
LMNB1-204ENST00000463908 GIMAP8Q8ND71 665 aaPredicted RBP21.5■■□□□ 1.03
LMNB1-204ENST00000463908 PPTC7Q8NI37 304 aa21.5■■□□□ 1.03
LMNB1-204ENST00000463908 A0A1W2PQ45 241 aaPredicted RBP21.49■■□□□ 1.03
LMNB1-204ENST00000463908 A0A1W2PQY0 241 aa21.49■■□□□ 1.03
LMNB1-204ENST00000463908 H3BQV1 296 aa21.49■■□□□ 1.03
LMNB1-204ENST00000463908 IPO5O00410 1097 aaKnown RBP21.49■■□□□ 1.03
LMNB1-204ENST00000463908 SLC37A4O43826 429 aa21.49■■□□□ 1.03
LMNB1-204ENST00000463908 HOXD8P13378 290 aaPredicted RBP21.49■■□□□ 1.03
LMNB1-204ENST00000463908 SYT1P21579 422 aa21.49■■□□□ 1.03
LMNB1-204ENST00000463908 PURAQ00577 322 aaKnown RBP21.49■■□□□ 1.03
LMNB1-204ENST00000463908 SPRYD3Q8NCJ5 442 aa21.49■■□□□ 1.03
LMNB1-204ENST00000463908 GJA10Q969M2 543 aa21.49■■□□□ 1.03
LMNB1-204ENST00000463908 GPR20Q99678 358 aa21.49■■□□□ 1.03
LMNB1-204ENST00000463908 NFASCO94856 1347 aa21.49■■□□□ 1.03
LMNB1-204ENST00000463908 GSTTP1A0A1W2PQM5 241 aa21.48■■□□□ 1.03
LMNB1-204ENST00000463908 ZEB2O60315 1214 aa21.48■■□□□ 1.03
LMNB1-204ENST00000463908 CCNT1O60563 726 aaKnown RBP21.48■■□□□ 1.03
LMNB1-204ENST00000463908 PPFIA4O75335 1185 aa21.48■■□□□ 1.03
LMNB1-204ENST00000463908 MYL3P08590 195 aa21.48■■□□□ 1.03
LMNB1-204ENST00000463908 TOB1P50616 345 aaPredicted RBP21.48■■□□□ 1.03
LMNB1-204ENST00000463908 SETQ01105 290 aaPredicted RBP21.48■■□□□ 1.03
LMNB1-204ENST00000463908 ZNF577Q9BSK1 485 aa21.48■■□□□ 1.03
LMNB1-204ENST00000463908 DDX25Q9UHL0 483 aaKnown RBP21.48■■□□□ 1.03
LMNB1-204ENST00000463908 GRIN2DO15399 1336 aa21.48■■□□□ 1.03
LMNB1-204ENST00000463908 CEP290O15078 2479 aa21.48■■□□□ 1.03
LMNB1-204ENST00000463908 ATP2B1P20020 1258 aa21.47■■□□□ 1.03
LMNB1-204ENST00000463908 HABP4Q5JVS0 413 aaKnown RBP21.47■■□□□ 1.03
LMNB1-204ENST00000463908 MCTP1Q6DN14 999 aa21.47■■□□□ 1.03
LMNB1-204ENST00000463908 SLC39A5Q6ZMH5 540 aa21.47■■□□□ 1.03
LMNB1-204ENST00000463908 ETNPPLQ8TBG4 499 aa21.47■■□□□ 1.03
LMNB1-204ENST00000463908 KAT2BQ92831 832 aa21.47■■□□□ 1.03
LMNB1-204ENST00000463908 SLC5A5Q92911 643 aa21.47■■□□□ 1.03
LMNB1-204ENST00000463908 POLR3EQ9NVU0 708 aa21.47■■□□□ 1.03
LMNB1-204ENST00000463908 KPNA6O60684 536 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 CCNE2O96020 404 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 GCFC2P16383 781 aaKnown RBP21.46■■□□□ 1.03
LMNB1-204ENST00000463908 PDCP20941 246 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 ATN1P54259 1190 aaPredicted RBP21.46■■□□□ 1.03
LMNB1-204ENST00000463908 SP4Q02446 784 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 GNL2Q13823 731 aaKnown RBP21.46■■□□□ 1.03
LMNB1-204ENST00000463908 DGKDQ16760 1214 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 BRDTQ58F21 947 aaPredicted RBP21.46■■□□□ 1.03
LMNB1-204ENST00000463908 HAS1Q92839 578 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 SDF4Q9BRK5 362 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 JPH1Q9HDC5 661 aaPredicted RBP21.46■■□□□ 1.03
LMNB1-204ENST00000463908 KCNMB3Q9NPA1 279 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 SLC9A2Q9UBY0 812 aa21.46■■□□□ 1.03
LMNB1-204ENST00000463908 DDX39AO00148 427 aaKnown RBP21.45■■□□□ 1.02
LMNB1-204ENST00000463908 PSMC6P62333 389 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 LRRC26Q2I0M4 334 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 SEPT1Q8WYJ6 367 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 GLT1D1Q96MS3 346 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 NAP1L4Q99733 375 aaKnown RBP21.45■■□□□ 1.02
LMNB1-204ENST00000463908 C16orf70Q9BSU1 422 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 MTG1Q9BT17 334 aaPredicted RBP21.45■■□□□ 1.02
LMNB1-204ENST00000463908 STARD7Q9NQZ5 370 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 TBC1D22BQ9NU19 505 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 MTMR6Q9Y217 621 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 ELP1O95163 1332 aa21.45■■□□□ 1.02
LMNB1-204ENST00000463908 DOCK5Q9H7D0 1870 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 NOP56O00567 594 aaKnown RBP21.44■■□□□ 1.02
LMNB1-204ENST00000463908 PSMD10O75832 226 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 CABYRO75952 493 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 ATG7O95352 703 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 HSP90AA1P07900 732 aaKnown RBP21.44■■□□□ 1.02
LMNB1-204ENST00000463908 CDK7P50613 346 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 ACTR2P61160 394 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 SNX17Q15036 470 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 VTI1AQ96AJ9 217 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 RIT2Q99578 217 aa21.44■■□□□ 1.02
LMNB1-204ENST00000463908 VPS37CA5D8V6 355 aaPredicted RBP21.43■■□□□ 1.02
LMNB1-204ENST00000463908 ZNF286BP0CG31 522 aa21.43■■□□□ 1.02
LMNB1-204ENST00000463908 NBR1Q14596 966 aa21.43■■□□□ 1.02
LMNB1-204ENST00000463908 ZNF174Q15697 407 aa21.43■■□□□ 1.02
LMNB1-204ENST00000463908 C1orf53Q5VUE5 145 aa21.43■■□□□ 1.02
LMNB1-204ENST00000463908 B3GNT9Q6UX72 402 aa21.43■■□□□ 1.02
LMNB1-204ENST00000463908 SLC43A3Q8NBI5 491 aa21.43■■□□□ 1.02
LMNB1-204ENST00000463908 PPP1R13LQ8WUF5 828 aa21.43■■□□□ 1.02
LMNB1-204ENST00000463908 PCYT2Q99447 389 aa21.43■■□□□ 1.02
LMNB1-204ENST00000463908 HAS3O00219 553 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 STX6O43752 255 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 LGALS2P05162 132 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 MCM7P33993 719 aa21.42■■□□□ 1.02
LMNB1-204ENST00000463908 TCF7P36402 384 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms