RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ZBTB39O15060 712 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 ARHGAP6O43182 974 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 NRDCO43847 1150 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 STX10O60499 249 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 TPM2P07951 284 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 ERCC3P19447 782 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 PRKG1Q13976 671 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 MB21D1Q8N884 522 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 TUBGCP2Q9BSJ2 902 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 DESI2Q9BSY9 194 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 LRRC27Q9C0I9 530 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 PPP1R9AQ9ULJ8 1098 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 SSC5DA1L4H1 1573 aa14.27□□□□□ -0.13
VAPB-203ENST00000463370 PRKCSHP14314 528 aaPredicted RBP14.26□□□□□ -0.13
VAPB-203ENST00000463370 ITGB5P18084 799 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 KLK7P49862 253 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 BACE1P56817 501 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 CTTNQ14247 550 aaKnown RBP14.26□□□□□ -0.13
VAPB-203ENST00000463370 LRCH2Q5VUJ6 765 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 REXO1L1PQ8IX06 675 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 ERMNQ8TAM6 284 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 SLC5A5Q92911 643 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 PURBQ96QR8 312 aaKnown RBP14.26□□□□□ -0.13
VAPB-203ENST00000463370 FHDC1Q9C0D6 1143 aaPredicted RBP14.26□□□□□ -0.13
VAPB-203ENST00000463370 LMNB1P20700 586 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 MIIPQ5JXC2 388 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 FAM26FQ5R3K3 315 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 DCAF15Q66K64 600 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 RAD9BQ6WBX8 426 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 GPC2Q8N158 579 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 PIGOQ8TEQ8 1089 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 PANX2Q96RD6 677 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 HSD17B14Q9BPX1 270 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 WRAP73Q9P2S5 460 aaPredicted RBP14.26□□□□□ -0.13
VAPB-203ENST00000463370 MAGEC2Q9UBF1 373 aaPredicted RBP14.26□□□□□ -0.13
VAPB-203ENST00000463370 ZHX2Q9Y6X8 837 aa14.26□□□□□ -0.13
VAPB-203ENST00000463370 FANCGO15287 622 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 DDNO94850 711 aaPredicted RBP14.25□□□□□ -0.13
VAPB-203ENST00000463370 SLITRK3O94933 977 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 HMGCS2P54868 508 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 GIT2Q14161 759 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 HERC4Q5GLZ8 1057 aaPredicted RBP14.25□□□□□ -0.13
VAPB-203ENST00000463370 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
VAPB-203ENST00000463370 SYT2Q8N9I0 419 aaPredicted RBP14.25□□□□□ -0.13
VAPB-203ENST00000463370 ZNF280CQ8ND82 737 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 NOC3LQ8WTT2 800 aaKnown RBP14.25□□□□□ -0.13
VAPB-203ENST00000463370 RUSC1Q9BVN2 902 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 BHMT2Q9H2M3 363 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
VAPB-203ENST00000463370 GINM1Q9NU53 330 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 PKD2L1Q9P0L9 805 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 DNM3Q9UQ16 869 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 PPP2R2CQ9Y2T4 447 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 RIPK3Q9Y572 518 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 A0A0U1RQJ8 604 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 FRMD3A2A2Y4 597 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 PPP1R2P41236 205 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 CASP5P51878 434 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 PSMD2Q13200 908 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 LRRC55Q6ZSA7 311 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 NELFCDQ8IXH7 590 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 SYTL5Q8TDW5 730 aaPredicted RBP14.25□□□□□ -0.13
VAPB-203ENST00000463370 ATRIPQ8WXE1 791 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 KLRG1Q96E93 195 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 DYDC2Q96IM9 177 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 REEP2Q9BRK0 252 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 ZNF577Q9BSK1 485 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 UNC45AQ9H3U1 944 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 ZHX3Q9H4I2 956 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 PICK1Q9NRD5 415 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 RPTORQ8N122 1335 aa14.25□□□□□ -0.13
VAPB-203ENST00000463370 RSPH10B2B2RC85 870 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 VWA5AO00534 786 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 SLC26A4O43511 780 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 GAS7O60861 476 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 KRT18P05783 430 aaKnown RBP14.24□□□□□ -0.13
VAPB-203ENST00000463370 RSPH10BP0C881 870 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 PPP2R5CQ13362 524 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 ZCWPW2Q504Y3 356 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 TEX2Q8IWB9 1127 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 SCFD1Q8WVM8 642 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 POLR3CQ9BUI4 534 aaPredicted RBP14.24□□□□□ -0.13
VAPB-203ENST00000463370 GTPBP4Q9BZE4 634 aaKnown RBP14.24□□□□□ -0.13
VAPB-203ENST00000463370 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 ABHD10Q9NUJ1 306 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 TTC26A0AVF1 554 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 DDX39AO00148 427 aaKnown RBP14.24□□□□□ -0.13
VAPB-203ENST00000463370 MTIF2P46199 727 aaKnown RBP14.24□□□□□ -0.13
VAPB-203ENST00000463370 RPS6P62753 249 aaKnown RBP14.24□□□□□ -0.13
VAPB-203ENST00000463370 MRPS9P82933 396 aaKnown RBP14.24□□□□□ -0.13
VAPB-203ENST00000463370 TPH2Q8IWU9 490 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 CCDC65Q8IXS2 484 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 TAAR1Q96RJ0 339 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 MXRA8Q9BRK3 442 aa14.24□□□□□ -0.13
VAPB-203ENST00000463370 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.24□□□□□ -0.134e-13■□□□□ 9.8
VAPB-203ENST00000463370 IPO5O00410 1097 aaKnown RBP14.23□□□□□ -0.13
VAPB-203ENST00000463370 USP14P54578 494 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms