RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PTPROQ16827 1216 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 SMYD5Q6GMV2 418 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 FAM117BQ6P1L5 589 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 RNF207Q6ZRF8 634 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 EMID1Q96A84 441 aaPredicted RBP9.11□□□□□ -0.95
SMC3-202ENST00000462899 CHMP4CQ96CF2 233 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 NSUN3Q9H649 340 aaKnown RBP9.11□□□□□ -0.95
SMC3-202ENST00000462899 RC3H2Q9HBD1 1191 aaKnown RBP9.11□□□□□ -0.95
SMC3-202ENST00000462899 HDAC6Q9UBN7 1215 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 STX8Q9UNK0 236 aa9.11□□□□□ -0.95
SMC3-202ENST00000462899 KAT6AQ92794 2004 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 ZFHX4Q86UP3 3567 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.1□□□□□ -0.95
SMC3-202ENST00000462899 C5orf67F2Z3F1 127 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 HMMRO75330 724 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 TBX10O75333 385 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 ZFYP08048 801 aaPredicted RBP9.1□□□□□ -0.95
SMC3-202ENST00000462899 CALML3P27482 149 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 SLC16A2P36021 539 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 PTPN5P54829 565 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 PDE4DQ08499 809 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 PLEKHG4Q58EX7 1191 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 SYDE2Q5VT97 1194 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 RPAINQ86UA6 219 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 FBXO11Q86XK2 927 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 RNF135Q8IUD6 432 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 DBF4BQ8NFT6 615 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 EDAQ92838 391 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 TOP1MTQ969P6 601 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 SEC62Q99442 399 aaKnown RBP9.1□□□□□ -0.95
SMC3-202ENST00000462899 OSBPL7Q9BZF2 842 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 UPF3BQ9BZI7 483 aaKnown RBP9.1□□□□□ -0.95
SMC3-202ENST00000462899 ECHDC1Q9NTX5 307 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 FAM50BQ9Y247 325 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 VPS9D1Q9Y2B5 631 aa9.1□□□□□ -0.95
SMC3-202ENST00000462899 EMSYQ7Z589 1322 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 KMT2BQ9UMN6 2715 aaPredicted RBP9.09□□□□□ -0.95
SMC3-202ENST00000462899 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 GH1P01241 217 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 SNHG28P0DPA3 235 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 ZNF200P98182 395 aaPredicted RBP9.09□□□□□ -0.95
SMC3-202ENST00000462899 HYAL1Q12794 435 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 SMAD4Q13485 552 aaKnown RBP9.09□□□□□ -0.95
SMC3-202ENST00000462899 GPM6BQ13491 265 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 LY6KQ17RY6 165 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 SERINC5Q86VE9 423 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 TMEM192Q8IY95 271 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 MYOCDQ8IZQ8 938 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 RGS22Q8NE09 1264 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 MAF1Q9H063 256 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 INCENPQ9NQS7 918 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 CLDND1Q9NY35 253 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 COL20A1Q9P218 1284 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 ANAPC4Q9UJX5 808 aa9.09□□□□□ -0.95
SMC3-202ENST00000462899 ISY1Q9ULR0 285 aaKnown RBP9.09□□□□□ -0.95
SMC3-202ENST00000462899 TSPY2A6NKD2 308 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 NCK2O43639 380 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 ORC4O43929 436 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 SMARCA5O60264 1052 aaPredicted RBP9.08□□□□□ -0.96
SMC3-202ENST00000462899 EYA4O95677 639 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 AMHP03971 560 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 PDHBP11177 359 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 CASTP20810 708 aaKnown RBP9.08□□□□□ -0.96
SMC3-202ENST00000462899 CAMK1Q14012 370 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 CBX2Q14781 532 aaPredicted RBP9.08□□□□□ -0.96
SMC3-202ENST00000462899 DGKDQ16760 1214 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 KIAA0753Q2KHM9 967 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 CCDC96Q2M329 555 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 ZMYM1Q5SVZ6 1142 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 TSHZ3Q63HK5 1081 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 SPNS2Q8IVW8 549 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 PPTC7Q8NI37 304 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 MSLNLQ96KJ4 702 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 MPHOSPH6Q99547 160 aaKnown RBP9.08□□□□□ -0.96
SMC3-202ENST00000462899 POP1Q99575 1024 aaKnown RBP9.08□□□□□ -0.96
SMC3-202ENST00000462899 PRRX2Q99811 253 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 TMEM47Q9BQJ4 181 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 KATNAL1Q9BW62 490 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 LRRCC1Q9C099 1032 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 NPDC1Q9NQX5 325 aaPredicted RBP9.08□□□□□ -0.96
SMC3-202ENST00000462899 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
SMC3-202ENST00000462899 PNMA2Q9UL42 364 aa9.08□□□□□ -0.96
SMC3-202ENST00000462899 FNDC1Q4ZHG4 1894 aaPredicted RBP9.08□□□□□ -0.96
SMC3-202ENST00000462899 FRMPD2Q68DX3 1309 aaPredicted RBP9.07□□□□□ -0.96
SMC3-202ENST00000462899 TMEM221A6NGB7 291 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 LOC730098B7Z3J9 87 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 M0R296 226 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 APPP05067 770 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 SLC3A2P08195 630 aaKnown RBP9.07□□□□□ -0.96
SMC3-202ENST00000462899 ZNF286BP0CG31 522 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 GTF2F1P35269 517 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMC3-202ENST00000462899 FOXK2Q01167 660 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 CTDSPL2Q05D32 466 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 ZNF543Q08ER8 600 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 PKN1Q16512 942 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 C7orf31Q8N865 590 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 TBC1D5Q92609 795 aa9.07□□□□□ -0.96
SMC3-202ENST00000462899 CLP1Q92989 425 aaKnown RBP9.07□□□□□ -0.96
SMC3-202ENST00000462899 ASIC4Q96FT7 647 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms