RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 GHRHRQ02643 423 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 PPATQ06203 517 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 MAP1SQ66K74 1059 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-213ENST00000462730 ERO1BQ86YB8 467 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 DDX12PQ92771 950 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 HPS3Q969F9 1004 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 TRERF1Q96PN7 1200 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 COL20A1Q9P218 1284 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 VAV3Q9UKW4 847 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 A0A0G2JMZ2 1700 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 SPDYE16A6NNV3 312 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-213ENST00000462730 PLA2G4BP0C869 781 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 IDEP14735 1019 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 SPAG1Q07617 926 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 KRT31Q15323 416 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 FILIP1LQ4L180 1135 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 SNRNP48Q6IEG0 339 aaKnown RBP16.15■□□□□ 0.18
HDAC6-213ENST00000462730 TRIM47Q96LD4 638 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 SLC39A2Q9NP94 309 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 ADD3Q9UEY8 706 aaKnown RBP16.15■□□□□ 0.18
HDAC6-213ENST00000462730 LIMA1Q9UHB6 759 aaKnown RBP16.15■□□□□ 0.18
HDAC6-213ENST00000462730 PRDM4Q9UKN5 801 aa16.15■□□□□ 0.18
HDAC6-213ENST00000462730 ZNF214Q9UL59 606 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-213ENST00000462730 A0A0G2JLL6 359 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-213ENST00000462730 POTEFA5A3E0 1075 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 KCNJ18B7U540 433 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 TEX33O43247 280 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 PPP1R2P41236 205 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 OAZ1P54368 228 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 TBX2Q13207 712 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-213ENST00000462730 KCNJ12Q14500 433 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 TMEM132BQ14DG7 1078 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 SPECC1LQ69YQ0 1117 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 POTEGQ6S5H5 508 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 POTEEQ6S8J3 1075 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 ARMC9Q7Z3E5 817 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 PRRT2Q7Z6L0 340 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-213ENST00000462730 KIAA0895Q8NCT3 520 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 ANKRD20A12PQ8NF67 263 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 P2RX5Q93086 422 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 RNF146Q9NTX7 359 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 RIPK3Q9Y572 518 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 MYPNQ86TC9 1320 aa16.14■□□□□ 0.17
HDAC6-213ENST00000462730 TRAF5O00463 557 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 CTIFO43310 598 aaKnown RBP16.13■□□□□ 0.17
HDAC6-213ENST00000462730 CCNE1P24864 410 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 RPS6P62753 249 aaKnown RBP16.13■□□□□ 0.17
HDAC6-213ENST00000462730 GOLGA8FQ08AF8 430 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 GOLGA8DPQ0D2H9 430 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 COBLL1Q53SF7 1204 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 TTI2Q6NXR4 508 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 SLC30A10Q6XR72 485 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 GPBP1Q86WP2 473 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-213ENST00000462730 TAB2Q9NYJ8 693 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 BICDL2A1A5D9 508 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 NRDCO43847 1150 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 COPB1P53618 953 aaKnown RBP16.13■□□□□ 0.17
HDAC6-213ENST00000462730 CEP55Q53EZ4 464 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 LRCH2Q5VUJ6 765 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 GADL1Q6ZQY3 521 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 CATSPER3Q86XQ3 398 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 CREBRFQ8IUR6 639 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 PROCA1Q8NCQ7 364 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-213ENST00000462730 SYTL5Q8TDW5 730 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-213ENST00000462730 SLC5A5Q92911 643 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 DNAJC19Q96DA6 116 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 THAP9Q9H5L6 903 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 ZNF408Q9H9D4 720 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 BMP2KQ9NSY1 1161 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-213ENST00000462730 HOXC10Q9NYD6 342 aa16.13■□□□□ 0.17
HDAC6-213ENST00000462730 EML1O00423 815 aa16.12■□□□□ 0.17
HDAC6-213ENST00000462730 ATP2A1O14983 1001 aa16.12■□□□□ 0.17
HDAC6-213ENST00000462730 SPATA31C1P0DKV0 1188 aa16.12■□□□□ 0.17
HDAC6-213ENST00000462730 RPA1P27694 616 aa16.12■□□□□ 0.17
HDAC6-213ENST00000462730 COASYQ13057 564 aa16.12■□□□□ 0.17
HDAC6-213ENST00000462730 PPIL2Q13356 520 aa16.12■□□□□ 0.17
HDAC6-213ENST00000462730 NOC3LQ8WTT2 800 aaKnown RBP16.12■□□□□ 0.17
HDAC6-213ENST00000462730 DUSP9Q99956 384 aaKnown RBP16.12■□□□□ 0.17
HDAC6-213ENST00000462730 SRRTQ9BXP5 876 aaKnown RBP16.12■□□□□ 0.17
HDAC6-213ENST00000462730 TEX13BQ9BXU2 312 aa16.12■□□□□ 0.17
HDAC6-213ENST00000462730 MAP3K20Q9NYL2 800 aaKnown RBP16.12■□□□□ 0.17
HDAC6-213ENST00000462730 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-213ENST00000462730 MEIS1O00470 390 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 SETQ01105 290 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-213ENST00000462730 NSMFQ6X4W1 530 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 RNF207Q6ZRF8 634 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 IRF2BP1Q8IU81 584 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 SAMD3Q8N6K7 520 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 ANKRD7Q92527 254 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 EIF2AK1Q9BQI3 630 aaKnown RBP16.11■□□□□ 0.17
HDAC6-213ENST00000462730 VPS16Q9H269 839 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 PANK4Q9NVE7 773 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 KCNH4Q9UQ05 1017 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
HDAC6-213ENST00000462730 FRMPD4Q14CM0 1322 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms