RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TNNQ9UQP3 1299 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 PKD1L3Q7Z443 1732 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 SBF2Q86WG5 1849 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 HOXB7P09629 217 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 TRIM27P14373 513 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 NCAPHQ15003 741 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 DDR2Q16832 855 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 ANGEL2Q5VTE6 544 aaKnown RBP9.2□□□□□ -0.94
UBE4B-204ENST00000462658 CCDC30Q5VVM6 783 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 ZNF790Q6PG37 636 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 FTSJ3Q8IY81 847 aaKnown RBP9.2□□□□□ -0.94
UBE4B-204ENST00000462658 Q8N3U1 123 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 ADCY4Q8NFM4 1077 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 SYTL5Q8TDW5 730 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-204ENST00000462658 TCTN2Q96GX1 697 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 CHMP4AQ9BY43 222 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 ADAMTS7Q9UKP4 1686 aa9.2□□□□□ -0.94
UBE4B-204ENST00000462658 SHANK3Q9BYB0 1731 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 ZP2Q05996 745 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 SLC39A6Q13433 755 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 TCEAL1Q15170 157 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 NOL9Q5SY16 702 aaKnown RBP9.19□□□□□ -0.94
UBE4B-204ENST00000462658 ADAT2Q7Z6V5 191 aaKnown RBP9.19□□□□□ -0.94
UBE4B-204ENST00000462658 CCDC136Q96JN2 1154 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 DSCC1Q9BVC3 393 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 STK31Q9BXU1 1019 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 API5Q9BZZ5 524 aaKnown RBP9.19□□□□□ -0.94
UBE4B-204ENST00000462658 PCDHA11Q9Y5I1 949 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 SRCAPQ6ZRS2 3230 aa9.19□□□□□ -0.94
UBE4B-204ENST00000462658 ITGA4P13612 1032 aa9.18□□□□□ -0.94
UBE4B-204ENST00000462658 EIF2S2P20042 333 aaKnown RBP9.18□□□□□ -0.94
UBE4B-204ENST00000462658 CTSKP43235 329 aa9.18□□□□□ -0.94
UBE4B-204ENST00000462658 DDB1Q16531 1140 aa9.18□□□□□ -0.94
UBE4B-204ENST00000462658 TMPRSS7Q7RTY8 843 aa9.18□□□□□ -0.94
UBE4B-204ENST00000462658 TTC5Q8N0Z6 440 aa9.18□□□□□ -0.94
UBE4B-204ENST00000462658 DAGLBQ8NCG7 672 aa9.18□□□□□ -0.94
UBE4B-204ENST00000462658 ENOX1Q8TC92 643 aaKnown RBP9.18□□□□□ -0.94
UBE4B-204ENST00000462658 NOL6Q9H6R4 1146 aaKnown RBP9.18□□□□□ -0.94
UBE4B-204ENST00000462658 APEX2Q9UBZ4 518 aa9.18□□□□□ -0.94
UBE4B-204ENST00000462658 HEG1Q9ULI3 1381 aa9.18□□□□□ -0.94
UBE4B-204ENST00000462658 SCN11AQ9UI33 1791 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 MRC1P22897 1456 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 PTPRCP08575 1304 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 EGR3Q06889 387 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 PPP2R5DQ14738 602 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 MVPQ14764 893 aaKnown RBP9.17□□□□□ -0.94
UBE4B-204ENST00000462658 CRTC3Q6UUV7 619 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 PTF1AQ7RTS3 328 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 KRT27Q7Z3Y8 459 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 DEFB132Q7Z7B7 95 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 FIBCD1Q8N539 461 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 LGR4Q9BXB1 951 aa9.17□□□□□ -0.94
UBE4B-204ENST00000462658 TNS2Q63HR2 1409 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 ANKRD34BA5PLL1 514 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 CCDC85CA6NKD9 419 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 FUT4P22083 530 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 GP2P55259 537 aaKnown RBP9.16□□□□□ -0.94
UBE4B-204ENST00000462658 PLCL1Q15111 1095 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 G2E3Q7L622 706 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 ITPRIPQ8IWB1 547 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 TMEM57Q8N5G2 664 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 ZNF655Q8N720 491 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-204ENST00000462658 ZNF496Q96IT1 587 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-204ENST00000462658 FMNL2Q96PY5 1086 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 FOXP3Q9BZS1 431 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 GBP3Q9H0R5 595 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 WHRNQ9P202 907 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 ADAMTS6Q9UKP5 1117 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 SUGT1Q9Y2Z0 365 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 FHOD1Q9Y613 1164 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 KDM3BQ7LBC6 1761 aa9.16□□□□□ -0.94
UBE4B-204ENST00000462658 SIPA1L3O60292 1781 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-204ENST00000462658 PRAMEF22A3QJZ6 481 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 H0Y8X5 98 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 SUSD5O60279 629 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 SYPP08247 313 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 SNRPA1P09661 255 aaKnown RBP9.15□□□□□ -0.94
UBE4B-204ENST00000462658 ABI1Q8IZP0 508 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 ZNF513Q8N8E2 541 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-204ENST00000462658 MARCH10Q8NA82 808 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-204ENST00000462658 PIGBQ92521 554 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 UBXN4Q92575 508 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 ZDHHC15Q96MV8 337 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 APBA2Q99767 749 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 PRR13Q9NZ81 148 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 DDX19BQ9UMR2 479 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 OAS3Q9Y6K5 1087 aaKnown RBP9.15□□□□□ -0.94
UBE4B-204ENST00000462658 RREB1Q92766 1687 aa9.15□□□□□ -0.94
UBE4B-204ENST00000462658 ABCC4O15439 1325 aa9.14□□□□□ -0.95
UBE4B-204ENST00000462658 FKTNO75072 461 aa9.14□□□□□ -0.95
UBE4B-204ENST00000462658 PPM1BO75688 479 aa9.14□□□□□ -0.95
UBE4B-204ENST00000462658 PI4K2BQ8TCG2 481 aa9.14□□□□□ -0.95
UBE4B-204ENST00000462658 PPP1R14AQ96A00 147 aa9.14□□□□□ -0.95
UBE4B-204ENST00000462658 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
UBE4B-204ENST00000462658 CHPF2Q9P2E5 772 aa9.14□□□□□ -0.95
UBE4B-204ENST00000462658 DBF4Q9UBU7 674 aaPredicted RBP9.14□□□□□ -0.95
UBE4B-204ENST00000462658 TCFL5Q9UL49 500 aa9.14□□□□□ -0.95
UBE4B-204ENST00000462658 VIRMAQ69YN4 1812 aaKnown RBP9.14□□□□□ -0.95
UBE4B-204ENST00000462658 NUP188Q5SRE5 1749 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms