RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 EMID1Q96A84 441 aaPredicted RBP21.78■■□□□ 1.08
XPA-202ENST00000462523 ZNF577Q9BSK1 485 aa21.78■■□□□ 1.08
XPA-202ENST00000462523 KCNMB3Q9NPA1 279 aa21.78■■□□□ 1.08
XPA-202ENST00000462523 GH1P01241 217 aa21.78■■□□□ 1.08
XPA-202ENST00000462523 PDIA4P13667 645 aaKnown RBP21.78■■□□□ 1.08
XPA-202ENST00000462523 MNX1P50219 401 aaPredicted RBP21.78■■□□□ 1.08
XPA-202ENST00000462523 HSDL1Q3SXM5 330 aa21.78■■□□□ 1.08
XPA-202ENST00000462523 RILPL1Q5EBL4 403 aa21.78■■□□□ 1.08
XPA-202ENST00000462523 OR6J1Q8NGC5 347 aa21.78■■□□□ 1.08
XPA-202ENST00000462523 SLC5A5Q92911 643 aa21.78■■□□□ 1.08
XPA-202ENST00000462523 NAP1L4Q99733 375 aaKnown RBP21.78■■□□□ 1.08
XPA-202ENST00000462523 TMEM60Q9H2L4 133 aa21.78■■□□□ 1.08
XPA-202ENST00000462523 NOL7Q9UMY1 257 aaKnown RBP21.78■■□□□ 1.08
XPA-202ENST00000462523 F13A1P00488 732 aa21.77■■□□□ 1.08
XPA-202ENST00000462523 BEX3Q00994 111 aa21.77■■□□□ 1.08
XPA-202ENST00000462523 NEDD9Q14511 834 aa21.77■■□□□ 1.08
XPA-202ENST00000462523 CCSAPQ6IQ19 270 aaPredicted RBP21.77■■□□□ 1.08
XPA-202ENST00000462523 METTL7BQ6UX53 244 aa21.77■■□□□ 1.08
XPA-202ENST00000462523 DHX37Q8IY37 1157 aaKnown RBP21.77■■□□□ 1.08
XPA-202ENST00000462523 KLHDC9Q8NEP7 349 aa21.77■■□□□ 1.08
XPA-202ENST00000462523 TMEM106CQ9BVX2 250 aa21.77■■□□□ 1.08
XPA-202ENST00000462523 NFASCO94856 1347 aa21.76■■□□□ 1.07
XPA-202ENST00000462523 NEMFO60524 1076 aa21.76■■□□□ 1.07
XPA-202ENST00000462523 C6orf222P0C671 652 aaPredicted RBP21.76■■□□□ 1.07
XPA-202ENST00000462523 LRRC41Q15345 812 aa21.76■■□□□ 1.07
XPA-202ENST00000462523 C4orf32Q8N8J7 132 aa21.76■■□□□ 1.07
XPA-202ENST00000462523 AFG1LQ8WV93 481 aa21.76■■□□□ 1.07
XPA-202ENST00000462523 MTMR9Q96QG7 549 aa21.76■■□□□ 1.07
XPA-202ENST00000462523 ZSCAN16Q9H4T2 348 aaPredicted RBP21.76■■□□□ 1.07
XPA-202ENST00000462523 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.76■■□□□ 1.07
XPA-202ENST00000462523 A6NJR5 290 aa21.75■■□□□ 1.07
XPA-202ENST00000462523 PSMD10O75832 226 aa21.75■■□□□ 1.07
XPA-202ENST00000462523 LAMC2Q13753 1193 aa21.75■■□□□ 1.07
XPA-202ENST00000462523 FTOQ9C0B1 505 aaKnown RBP eCLIP21.75■■□□□ 1.07
XPA-202ENST00000462523 AP5M1Q9H0R1 490 aa21.75■■□□□ 1.07
XPA-202ENST00000462523 MLXIPQ9HAP2 919 aa21.75■■□□□ 1.07
XPA-202ENST00000462523 DDX39AO00148 427 aaKnown RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 CCNE2O96020 404 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 CST5P28325 142 aaPredicted RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 FSCN1Q16658 493 aaKnown RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 GIMAP8Q8ND71 665 aaPredicted RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 PPTC7Q8NI37 304 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 SPATA33Q96N06 139 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 JPH1Q9HDC5 661 aaPredicted RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 TBX3O15119 743 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 TFRCP02786 760 aaKnown RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 MMP3P08254 477 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 EN2P19622 333 aaPredicted RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 SP4Q02446 784 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 ORC2Q13416 577 aaPredicted RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 IPO9Q96P70 1041 aaKnown RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 RIT2Q99578 217 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 GPR20Q99678 358 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 SDF4Q9BRK5 362 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 SLC9A2Q9UBY0 812 aa21.74■■□□□ 1.07
XPA-202ENST00000462523 DAXXQ9UER7 740 aaPredicted RBP21.74■■□□□ 1.07
XPA-202ENST00000462523 MYCNP04198 464 aaPredicted RBP21.73■■□□□ 1.07
XPA-202ENST00000462523 HOXD8P13378 290 aaPredicted RBP21.73■■□□□ 1.07
XPA-202ENST00000462523 CALCRLQ16602 461 aa21.73■■□□□ 1.07
XPA-202ENST00000462523 GNASQ5JWF2 1037 aa21.73■■□□□ 1.07
XPA-202ENST00000462523 LRCH2Q5VUJ6 765 aa21.73■■□□□ 1.07
XPA-202ENST00000462523 B3GNT9Q6UX72 402 aa21.73■■□□□ 1.07
XPA-202ENST00000462523 FAM20AQ96MK3 541 aa21.73■■□□□ 1.07
XPA-202ENST00000462523 TBC1D22BQ9NU19 505 aa21.73■■□□□ 1.07
XPA-202ENST00000462523 VAV3Q9UKW4 847 aa21.73■■□□□ 1.07
XPA-202ENST00000462523 PTGDRQ13258 359 aa21.72■■□□□ 1.07
XPA-202ENST00000462523 KCNA10Q16322 511 aa21.72■■□□□ 1.07
XPA-202ENST00000462523 RNF180Q86T96 592 aa21.72■■□□□ 1.07
XPA-202ENST00000462523 SPC25Q9HBM1 224 aa21.72■■□□□ 1.07
XPA-202ENST00000462523 CLIC4Q9Y696 253 aa21.72■■□□□ 1.07
XPA-202ENST00000462523 GSTTP1A0A1W2PQM5 241 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 CCDC85CA6NKD9 419 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 DNM1LO00429 736 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 GAS7O60861 476 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 CPT1AP50416 773 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 SOX10P56693 466 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 ACTR2P61160 394 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 SPIRE1Q08AE8 756 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 FOXD4L6Q3SYB3 417 aaPredicted RBP21.71■■□□□ 1.07
XPA-202ENST00000462523 FOXD4L3Q6VB84 417 aaPredicted RBP21.71■■□□□ 1.07
XPA-202ENST00000462523 ARRDC4Q8NCT1 418 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 DIS3LQ8TF46 1054 aaKnown RBP21.71■■□□□ 1.07
XPA-202ENST00000462523 USP28Q96RU2 1077 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 UNC45AQ9H3U1 944 aa21.71■■□□□ 1.07
XPA-202ENST00000462523 WDR81Q562E7 1941 aa21.7■■□□□ 1.07
XPA-202ENST00000462523 SF3A1Q15459 793 aaKnown RBP21.7■■□□□ 1.06
XPA-202ENST00000462523 CHAMP1Q96JM3 812 aa21.7■■□□□ 1.06
XPA-202ENST00000462523 TEKT3Q9BXF9 490 aa21.7■■□□□ 1.06
XPA-202ENST00000462523 ATG7O95352 703 aa21.7■■□□□ 1.06
XPA-202ENST00000462523 ASGR1P07306 291 aa21.7■■□□□ 1.06
XPA-202ENST00000462523 OR52Z1P0C646 297 aa21.7■■□□□ 1.06
XPA-202ENST00000462523 ATP2C1P98194 919 aaPredicted RBP21.7■■□□□ 1.06
XPA-202ENST00000462523 PURAQ00577 322 aaKnown RBP21.7■■□□□ 1.06
XPA-202ENST00000462523 IL17AQ16552 155 aa21.7■■□□□ 1.06
XPA-202ENST00000462523 SLFN12Q8IYM2 578 aa21.7■■□□□ 1.06
XPA-202ENST00000462523 ELP1O95163 1332 aa21.69■■□□□ 1.06
XPA-202ENST00000462523 NOP56O00567 594 aaKnown RBP21.69■■□□□ 1.06
XPA-202ENST00000462523 TCF7P36402 384 aaPredicted RBP21.69■■□□□ 1.06
XPA-202ENST00000462523 TXKP42681 527 aa21.69■■□□□ 1.06
XPA-202ENST00000462523 ACLYP53396 1101 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms