RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TRMT13Q9NUP7 481 aaKnown RBP10.2□□□□□ -0.78
DDX39B-216ENST00000462421 ESYT2A0FGR8 921 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 SPATA31C2B4DYI2 1134 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 H3BRB1 525 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 STXBP3O00186 592 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 BACH1O14867 736 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 EFCAB14O75071 495 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 F2P00734 622 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 CYP2C9P11712 490 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 CSF2RAP15509 400 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 IFNAR1P17181 557 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 SMAD3P84022 425 aaKnown RBP10.19□□□□□ -0.78
DDX39B-216ENST00000462421 PTK7Q13308 1070 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 SHHQ15465 462 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 JAKMIP3Q5VZ66 844 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 GALNT17Q6IS24 598 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 DEFB128Q7Z7B8 93 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 CKAP2LQ8IYA6 745 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 FAM177A1Q8N128 213 aaPredicted RBP10.19□□□□□ -0.78
DDX39B-216ENST00000462421 SLC43A3Q8NBI5 491 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 IL31RAQ8NI17 732 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 AFAP1L1Q8TED9 768 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 ATP6V0A1Q93050 837 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 PHKBQ93100 1093 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 NAP1L4Q99733 375 aaKnown RBP10.19□□□□□ -0.78
DDX39B-216ENST00000462421 NOC4LQ9BVI4 516 aaKnown RBP10.19□□□□□ -0.78
DDX39B-216ENST00000462421 SMARCAD1Q9H4L7 1026 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 TUT1Q9H6E5 874 aaKnown RBP10.19□□□□□ -0.78
DDX39B-216ENST00000462421 JADE2Q9NQC1 790 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 ERAP1Q9NZ08 941 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 TRPC6Q9Y210 931 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 SAMM50Q9Y512 469 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 SLC4A7Q9Y6M7 1214 aa10.19□□□□□ -0.78
DDX39B-216ENST00000462421 EMSYQ7Z589 1322 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 MKI67P46013 3256 aaKnown RBP10.18□□□□□ -0.78
DDX39B-216ENST00000462421 CCDC194A0A1B0GVG4 234 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 CD4P01730 458 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 LGALS2P05162 132 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 SELPP16109 830 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 PDIA3P30101 505 aaKnown RBP10.18□□□□□ -0.78
DDX39B-216ENST00000462421 CDC27P30260 824 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 TCF7P36402 384 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-216ENST00000462421 ARHGAP4P98171 946 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 GNL2Q13823 731 aaKnown RBP10.18□□□□□ -0.78
DDX39B-216ENST00000462421 HSDL1Q3SXM5 330 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 CEP55Q53EZ4 464 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 MIS18BP1Q6P0N0 1132 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 LRRC8DQ7L1W4 858 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 SESTD1Q86VW0 696 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 ZFP91Q96JP5 570 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-216ENST00000462421 MXRA8Q9BRK3 442 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 ZNF577Q9BSK1 485 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 PRO3102Q9H379 93 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 HDAC6Q9UBN7 1215 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 SLC9A2Q9UBY0 812 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 GTF2IRD1Q9UHL9 959 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 KIF3AQ9Y496 699 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 LRRC37A2A6NM11 1700 aa10.18□□□□□ -0.78
DDX39B-216ENST00000462421 MYH6P13533 1939 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 NID2Q14112 1375 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 TMEM265A0A087WTH1 108 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 CAND2O75155 1236 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 BAIAP3O94812 1187 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 ACRP10323 421 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 PTGS1P23219 599 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 SREBF1P36956 1147 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 THPOP40225 353 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 NEK4P51957 841 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 MRPS9P82933 396 aaKnown RBP10.17□□□□□ -0.78
DDX39B-216ENST00000462421 SAFBQ15424 915 aaKnown RBP eCLIP10.17□□□□□ -0.78
DDX39B-216ENST00000462421 SLC35G1Q2M3R5 365 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 TMEM63BQ5T3F8 832 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 ZNF365Q70YC5 407 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 NIPA1Q7RTP0 329 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 PLA2G4DQ86XP0 818 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 LRCH3Q96II8 777 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 PGBD1Q96JS3 809 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 GAS2L1Q99501 681 aaPredicted RBP10.17□□□□□ -0.78
DDX39B-216ENST00000462421 GPR20Q99678 358 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 ZMYND12Q9H0C1 365 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 NCOA5Q9HCD5 579 aaKnown RBP10.17□□□□□ -0.78
DDX39B-216ENST00000462421 TBC1D22BQ9NU19 505 aa10.17□□□□□ -0.78
DDX39B-216ENST00000462421 NFASCO94856 1347 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 NRCAMQ92823 1304 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 DDX39AO00148 427 aaKnown RBP10.16□□□□□ -0.78
DDX39B-216ENST00000462421 ST18O60284 1047 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 SMIM10L2AP0DMW4 78 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 SMIM10L2BP0DMW5 78 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 MARK3P27448 753 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 SLC26A2P50443 739 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 PPFIA1Q13136 1202 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 C9orf50Q5SZB4 431 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 GDF6Q6KF10 455 aaPredicted RBP10.16□□□□□ -0.78
DDX39B-216ENST00000462421 TAF2Q6P1X5 1199 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 OTOP2Q7RTS6 562 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 KRT25Q7Z3Z0 450 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 HERVK_113Q902F9 699 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 TIFAQ96CG3 184 aa10.16□□□□□ -0.78
DDX39B-216ENST00000462421 SCLYQ96I15 445 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms