RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 ZKSCAN4Q969J2 545 aaPredicted RBP13.32□□□□□ -0.28
TNRC6A-204ENST00000462400 VIPAS39Q9H9C1 493 aa13.32□□□□□ -0.28
TNRC6A-204ENST00000462400 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
TNRC6A-204ENST00000462400 GPRC5DQ9NZD1 345 aa13.32□□□□□ -0.28
TNRC6A-204ENST00000462400 HPCAL4Q9UM19 191 aa13.32□□□□□ -0.28
TNRC6A-204ENST00000462400 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 CLK2P49760 499 aaKnown RBP13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 CNGA4Q8IV77 575 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 TBC1D5Q92609 795 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 PAGE5Q96GU1 130 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 VCPKMTQ9H867 229 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 RNF181Q9P0P0 153 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 SBF1O95248 1867 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 GYPCP04921 128 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 ASNSP08243 561 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 CCT5P48643 541 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 MRPL12P52815 198 aaKnown RBP13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 ARL6IP4Q66PJ3 421 aaKnown RBP13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 CCDC91Q7Z6B0 441 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 ELOA2Q8IYF1 753 aaPredicted RBP13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 AMNQ9BXJ7 453 aa13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 ADD3Q9UEY8 706 aaKnown RBP13.31□□□□□ -0.28
TNRC6A-204ENST00000462400 ERVK-24P63145 666 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 MAP3K10Q02779 954 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 STIM1Q13586 685 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 PPP1R18Q6NYC8 613 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 SMYD4Q8IYR2 804 aaPredicted RBP13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 TRIML1Q8N9V2 468 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 KAT2BQ92831 832 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 MTRQ99707 1265 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 ENC1O14682 589 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 MEIS2O14770 477 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 OPLAHO14841 1288 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 ZMYND10O75800 440 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 GGCXP38435 758 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 PBX1P40424 430 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 ARHGAP25P42331 645 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 AMPD2Q01433 879 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 MAP9Q49MG5 647 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 FAM107BQ9H098 131 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 RABEP2Q9H5N1 569 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
TNRC6A-204ENST00000462400 COBLO75128 1261 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 CHRM1P11229 460 aaPredicted RBP13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 CCT6AP40227 531 aaKnown RBP13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 USP14P54578 494 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 CALCRLQ16602 461 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 BTNL9Q6UXG8 535 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 GUCA1BQ9UMX6 200 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 POTEMA6NI47 508 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 CLSTN1O94985 981 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 UBA7P41226 1012 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 MNAT1P51948 309 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 CUL4BQ13620 913 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 PDXDC2PQ6P474 469 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 TMTC1Q8IUR5 882 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 GSPT2Q8IYD1 628 aaKnown RBP13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 GPC2Q8N158 579 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 COG1Q8WTW3 980 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 WRNIP1Q96S55 665 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 ANO3Q9BYT9 981 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 MYO1AQ9UBC5 1043 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 HDAC6Q9UBN7 1215 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 TRIM10Q9UDY6 481 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 FAM169AQ9Y6X4 670 aa13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 DICER1Q9UPY3 1922 aaKnown RBP13.29□□□□□ -0.28
TNRC6A-204ENST00000462400 EBAG9O00559 213 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 STAT6P42226 847 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 UBXN2AP68543 259 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 MTMR2Q13614 643 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 FAM76AQ8TAV0 307 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 CTAGE1Q96RT6 745 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 DDX25Q9UHL0 483 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 ZC3H4Q9UPT8 1303 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 CFBP00751 764 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 NAALADL2Q58DX5 795 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 FBXW10Q5XX13 1052 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 SH3RF1Q7Z6J0 888 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 CABP7Q86V35 215 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 SECISBP2LQ93073 1101 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 CCDC51Q96ER9 411 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 CAPZA3Q96KX2 299 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 DISC1Q9NRI5 854 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 ABHD10Q9NUJ1 306 aa13.28□□□□□ -0.28
TNRC6A-204ENST00000462400 GOLGA6CA6NDK9 693 aa13.27□□□□□ -0.28
TNRC6A-204ENST00000462400 RNF225M0QZC1 329 aaPredicted RBP13.27□□□□□ -0.28
TNRC6A-204ENST00000462400 SRGAP2O75044 1071 aa13.27□□□□□ -0.28
TNRC6A-204ENST00000462400 GOLGA6DP0CG33 693 aa13.27□□□□□ -0.28
TNRC6A-204ENST00000462400 SPP2Q13103 211 aa13.27□□□□□ -0.28
TNRC6A-204ENST00000462400 MTMR9Q96QG7 549 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms