RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 MAGEA10P43363 369 aaPredicted RBP18.08■□□□□ 0.48
ERCC3-206ENST00000462306 GALNT17Q6IS24 598 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 BLIDQ8IZY5 108 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 ZSCAN31Q96LW9 406 aaPredicted RBP18.08■□□□□ 0.48
ERCC3-206ENST00000462306 PHF20Q9BVI0 1012 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 GJB4Q9NTQ9 266 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 PRKAG2Q9UGJ0 569 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 TBX21Q9UL17 535 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 KCNJ14Q9UNX9 436 aa18.08■□□□□ 0.48
ERCC3-206ENST00000462306 IGLV3-22A0A075B6J6 115 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 FAM86B1E9PN63 330 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 F2P00734 622 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 FAM86B2P0C5J1 330 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 ZNF286BP0CG31 522 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 NFRKBQ6P4R8 1299 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 NIPA1Q7RTP0 329 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 GIMAP8Q8ND71 665 aaPredicted RBP18.07■□□□□ 0.48
ERCC3-206ENST00000462306 PPP1R13LQ8WUF5 828 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 WASF1Q92558 559 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 GPR20Q99678 358 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 C16orf70Q9BSU1 422 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 ALG1Q9BT22 464 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 TRPV6Q9H1D0 765 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 TMEM39AQ9NV64 488 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 PKD2L1Q9P0L9 805 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 DOCK5Q9H7D0 1870 aa18.07■□□□□ 0.48
ERCC3-206ENST00000462306 HAS3O00219 553 aa18.06■□□□□ 0.48
ERCC3-206ENST00000462306 TLR3O15455 904 aaKnown RBP18.06■□□□□ 0.48
ERCC3-206ENST00000462306 B4GALT4O60513 344 aa18.06■□□□□ 0.48
ERCC3-206ENST00000462306 CIITAP33076 1130 aa18.06■□□□□ 0.48
ERCC3-206ENST00000462306 BMP8BP34820 402 aa18.06■□□□□ 0.48
ERCC3-206ENST00000462306 ZNF76P36508 570 aa18.06■□□□□ 0.48
ERCC3-206ENST00000462306 MDM2Q00987 491 aaPredicted RBP18.06■□□□□ 0.48
ERCC3-206ENST00000462306 CCDC83Q8IWF9 413 aa18.06■□□□□ 0.48
ERCC3-206ENST00000462306 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
ERCC3-206ENST00000462306 SH2B1Q9NRF2 756 aaPredicted RBP18.06■□□□□ 0.48
ERCC3-206ENST00000462306 LTBP2Q14767 1821 aa18.06■□□□□ 0.48
ERCC3-206ENST00000462306 NOP56O00567 594 aaKnown RBP18.05■□□□□ 0.48
ERCC3-206ENST00000462306 XBP1P17861 261 aa18.05■□□□□ 0.48
ERCC3-206ENST00000462306 PSEN2P49810 448 aa18.05■□□□□ 0.48
ERCC3-206ENST00000462306 PTPN11Q06124 597 aaPredicted RBP18.05■□□□□ 0.48
ERCC3-206ENST00000462306 ITGB3BPQ13352 177 aaPredicted RBP18.05■□□□□ 0.48
ERCC3-206ENST00000462306 PLA2G4DQ86XP0 818 aa18.05■□□□□ 0.48
ERCC3-206ENST00000462306 AGO4Q9HCK5 861 aaKnown RBP18.05■□□□□ 0.48
ERCC3-206ENST00000462306 TRMT13Q9NUP7 481 aaKnown RBP18.05■□□□□ 0.48
ERCC3-206ENST00000462306 NFASCO94856 1347 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 ST18O60284 1047 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 CD2BP2O95400 341 aaKnown RBP18.04■□□□□ 0.48
ERCC3-206ENST00000462306 LGALS2P05162 132 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 USP11P51784 963 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 CHMP4BP1P59074 171 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 SP4Q02446 784 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 MFSD10Q14728 455 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 KIAA0753Q2KHM9 967 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 FAM47CQ5HY64 1035 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 SESTD1Q86VW0 696 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 OXER1Q8TDS5 423 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 TBCKQ8TEA7 893 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 BADQ92934 168 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 LBHD1Q9BQE6 289 aaPredicted RBP18.04■□□□□ 0.48
ERCC3-206ENST00000462306 LLPHQ9BRT6 129 aaKnown RBP18.04■□□□□ 0.48
ERCC3-206ENST00000462306 KATNAL1Q9BW62 490 aa18.04■□□□□ 0.48
ERCC3-206ENST00000462306 GSTTP1A0A1W2PQM5 241 aa18.03■□□□□ 0.48
ERCC3-206ENST00000462306 H3BRB1 525 aa18.03■□□□□ 0.48
ERCC3-206ENST00000462306 TIMP1P01033 207 aa18.03■□□□□ 0.48
ERCC3-206ENST00000462306 RAG1P15918 1043 aa18.03■□□□□ 0.48
ERCC3-206ENST00000462306 LENG9Q96B70 501 aa18.03■□□□□ 0.48
ERCC3-206ENST00000462306 TUT1Q9H6E5 874 aaKnown RBP18.03■□□□□ 0.48
ERCC3-206ENST00000462306 JPH1Q9HDC5 661 aaPredicted RBP18.03■□□□□ 0.48
ERCC3-206ENST00000462306 RANBP2P49792 3224 aaKnown RBP18.02■□□□□ 0.48
ERCC3-206ENST00000462306 DHX15O43143 795 aaKnown RBP18.02■□□□□ 0.48
ERCC3-206ENST00000462306 SUPT20HL2P0C7V6 817 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 NONOQ15233 471 aaKnown RBP eCLIP18.02■□□□□ 0.48
ERCC3-206ENST00000462306 PRR16Q569H4 304 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 HABP4Q5JVS0 413 aaKnown RBP18.02■□□□□ 0.48
ERCC3-206ENST00000462306 KRT25Q7Z3Z0 450 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 TRIM50Q86XT4 487 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 SEPT1Q8WYJ6 367 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 CTAGE1Q96RT6 745 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 SDF4Q9BRK5 362 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 SLC9A2Q9UBY0 812 aa18.02■□□□□ 0.48
ERCC3-206ENST00000462306 IPO5O00410 1097 aaKnown RBP18.01■□□□□ 0.47
ERCC3-206ENST00000462306 CYP2C9P11712 490 aa18.01■□□□□ 0.47
ERCC3-206ENST00000462306 TCF7P36402 384 aaPredicted RBP18.01■□□□□ 0.47
ERCC3-206ENST00000462306 SETQ01105 290 aaPredicted RBP18.01■□□□□ 0.47
ERCC3-206ENST00000462306 UTP14CQ5TAP6 766 aaKnown RBP18.01■□□□□ 0.47
ERCC3-206ENST00000462306 GDF6Q6KF10 455 aaPredicted RBP18.01■□□□□ 0.47
ERCC3-206ENST00000462306 C7orf31Q8N865 590 aa18.01■□□□□ 0.47
ERCC3-206ENST00000462306 TNFRSF25Q93038 417 aa18.01■□□□□ 0.47
ERCC3-206ENST00000462306 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
ERCC3-206ENST00000462306 PPP1R12CQ9BZL4 782 aa18.01■□□□□ 0.47
ERCC3-206ENST00000462306 UBE2OQ9C0C9 1292 aaKnown RBP18.01■□□□□ 0.47
ERCC3-206ENST00000462306 GTF2IRD1Q9UHL9 959 aa18.01■□□□□ 0.47
ERCC3-206ENST00000462306 UMODL1Q5DID0 1318 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 TRIOBPQ9H2D6 2365 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 CYP3A7-CYP3A51PA0A087WV96 503 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 A0A1W2PPC1 479 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 CCNE2O96020 404 aa18■□□□□ 0.47
ERCC3-206ENST00000462306 MMP1P03956 469 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms