RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 RRAGCQ9HB90 399 aa9.85□□□□□ -0.83
ECHDC1-212ENST00000461239 RAD18Q9NS91 495 aa9.85□□□□□ -0.83
ECHDC1-212ENST00000461239 NOP58Q9Y2X3 529 aaKnown RBP9.85□□□□□ -0.83
ECHDC1-212ENST00000461239 ZNF646O15015 1829 aaPredicted RBP9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 SHTN1A0MZ66 631 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 MEGF11A6BM72 1044 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 B2RBV5 119 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 PSMD14O00487 310 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 PDPK1O15530 556 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 IL15P40933 162 aaPredicted RBP9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 GYG1P46976 350 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 TFCP2Q12800 502 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 GPC2Q8N158 579 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 RUSC1Q9BVN2 902 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 MXD3Q9BW11 206 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 CD209Q9NNX6 404 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 KLHL3Q9UH77 587 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 WDR90Q96KV7 1748 aa9.84□□□□□ -0.83
ECHDC1-212ENST00000461239 CHURC1-FNTBB4DL54 471 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 ENPP3O14638 875 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 FANCGO15287 622 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 VIL1P09327 827 aaKnown RBP9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 IL1R1P14778 569 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 KCNJ4P48050 445 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 TIMM10P62072 90 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 ETF1P62495 437 aaKnown RBP9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 RAC1P63000 192 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 SNRPNP63162 240 aaKnown RBP9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 PUM3Q15397 648 aaKnown RBP9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 CIAPIN1Q6FI81 312 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 C6orf15Q6UXA7 325 aaPredicted RBP9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 UNC5AQ6ZN44 842 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 PODNQ7Z5L7 613 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 RPAP2Q8IXW5 612 aaPredicted RBP9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 FANCD2OSQ96PS1 177 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 SLC9A7Q96T83 725 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 DNAJC7Q99615 494 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 COA1Q9GZY4 146 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 SUGCTQ9HAC7 445 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 DISC1Q9NRI5 854 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 TJP2Q9UDY2 1190 aa9.83□□□□□ -0.84
ECHDC1-212ENST00000461239 SURF6O75683 361 aaKnown RBP9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 ADORA1P30542 326 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 EPS15P42566 896 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 GMPSP49915 693 aaPredicted RBP9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 ARSHQ5FYA8 562 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 DACT2Q5SW24 774 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 MRM1Q6IN84 353 aaKnown RBP9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 FAM178BQ8IXR5 827 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 LILRB2Q8N423 598 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 RNF214Q8ND24 703 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 TDRD7Q8NHU6 1098 aaKnown RBP9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 EXOC6Q8TAG9 804 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 LPIN2Q92539 896 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 EXOC6BQ9Y2D4 811 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 KDM2BQ8NHM5 1336 aa9.82□□□□□ -0.84
ECHDC1-212ENST00000461239 DDAH1O94760 285 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 ARHGEF15O94989 841 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 ADH5P11766 374 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 HSD3B2P26439 372 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 HIBADHP31937 336 aaKnown RBP9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 IRX6P78412 446 aaPredicted RBP9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 G3BP1Q13283 466 aaKnown RBP eCLIP9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 ATP2B3Q16720 1220 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 ACAD11Q709F0 780 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 MCATQ8IVS2 390 aaKnown RBP9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 CERS5Q8N5B7 392 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 SMG8Q8ND04 991 aaKnown RBP9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 PLVAPQ9BX97 442 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 RNF208Q9H0X6 261 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 TAF1DQ9H5J8 278 aaPredicted RBP9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 KANSL2Q9H9L4 492 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 FBRSQ9HAH7 460 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 JAG2Q9Y219 1238 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 SLC12A7Q9Y666 1083 aa9.81□□□□□ -0.84
ECHDC1-212ENST00000461239 COL1A1P02452 1464 aaPredicted RBP9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 PSME4Q14997 1843 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 A0A1B0GUL7 405 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 ANKRD62A6NC57 917 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 VEGFAP15692 232 aaPredicted RBP9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 PHKA1P46020 1223 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 IFRD2Q12894 506 aaPredicted RBP9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 TNIP1Q15025 636 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 STRIP1Q5VSL9 837 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 TTLL5Q6EMB2 1281 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 MRPL41Q8IXM3 137 aaKnown RBP9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 SLFN12Q8IYM2 578 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 SVOPQ8N4V2 548 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 TMEM87BQ96K49 555 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 CHMP4BQ9H444 224 aaKnown RBP9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 GSX1Q9H4S2 264 aaPredicted RBP9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 ENAMQ9NRM1 1142 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 GPRC5DQ9NZD1 345 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 ZNF609O15014 1411 aa9.8□□□□□ -0.84
ECHDC1-212ENST00000461239 FAM229AH3BQW9 127 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 TIAF1O95411 115 aa9.79□□□□□ -0.84
ECHDC1-212ENST00000461239 IFIT1P09914 478 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms