RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 SFPQP23246 707 aaKnown RBP eCLIP12.14□□□□□ -0.47
IFT88-204ENST00000461115 HOXA13P31271 388 aaPredicted RBP12.14□□□□□ -0.47
IFT88-204ENST00000461115 STX17P56962 302 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 SETQ01105 290 aaPredicted RBP12.14□□□□□ -0.47
IFT88-204ENST00000461115 CEP55Q53EZ4 464 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 TCP11X2Q5H9J9 407 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 CCDC84Q86UT8 332 aaPredicted RBP12.14□□□□□ -0.47
IFT88-204ENST00000461115 TMEM139Q8IV31 216 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 KIAA0895Q8NCT3 520 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 REPS2Q8NFH8 660 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 ERMNQ8TAM6 284 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 TMC2Q8TDI7 906 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 P2RX5Q93086 422 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 PLIN2Q99541 437 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 FEZ1Q99689 392 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 DUSP9Q99956 384 aaKnown RBP12.14□□□□□ -0.47
IFT88-204ENST00000461115 HSD17B14Q9BPX1 270 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 EXOC1Q9NV70 894 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
IFT88-204ENST00000461115 MED24O75448 989 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 CFBP00751 764 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 CCT6AP40227 531 aaKnown RBP12.13□□□□□ -0.47
IFT88-204ENST00000461115 EPS15P42566 896 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 SLC12A3P55017 1021 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 ASIC1P78348 528 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 KRT31Q15323 416 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 SUPT20HL1Q3ZLR7 823 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 CCDC174Q6PII3 467 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 OTOP1Q7RTM1 612 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 FCHSD1Q86WN1 690 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.47
IFT88-204ENST00000461115 DDX12PQ92771 950 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
IFT88-204ENST00000461115 PCDHA2Q9Y5H9 948 aa12.13□□□□□ -0.47
IFT88-204ENST00000461115 A0A1W2PQC6 194 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 TAL1P17542 331 aaPredicted RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 PMS1P54277 932 aaKnown RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 MTMR2Q13614 643 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 ZYXQ15942 572 aaKnown RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 FILIP1LQ4L180 1135 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 ARHGAP27Q6ZUM4 889 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 SYT2Q8N9I0 419 aaPredicted RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 TC2NQ8N9U0 490 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 ZNF507Q8TCN5 953 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 GJA10Q969M2 543 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 AGBL1Q96MI9 1066 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 RIT2Q99578 217 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 FHDC1Q9C0D6 1143 aaPredicted RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 TUFT1Q9NNX1 390 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 GGA3Q9NZ52 723 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 CCPG1Q9ULG6 757 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 SCAF8Q9UPN6 1271 aaKnown RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 KIAA1024Q9UPX6 916 aa12.12□□□□□ -0.47
IFT88-204ENST00000461115 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
IFT88-204ENST00000461115 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 VWA5AO00534 786 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 TEX33O43247 280 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 MARCH6O60337 910 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 PLA2G4BP0C869 781 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 FCER1AP12319 257 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 CYP11B2P19099 503 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 SPP2Q13103 211 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 ZCWPW2Q504Y3 356 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 PCNX4Q63HM2 1172 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 XRRA1Q6P2D8 792 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 KRT26Q7Z3Y9 468 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 CYP2W1Q8TAV3 490 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 PANX2Q96RD6 677 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 WDR11Q9BZH6 1224 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 RPAP3Q9H6T3 665 aaPredicted RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 COL20A1Q9P218 1284 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 AFG3L2Q9Y4W6 797 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 UBIAD1Q9Y5Z9 338 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 SCN4AP35499 1836 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 LCTP09848 1927 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 MYH11P35749 1972 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 POTEB3A0JP26 581 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 TRIM49BA6NDI0 452 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 POTECB2RU33 542 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 E9PMD0 336 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 NRDCO43847 1150 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 STX10O60499 249 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 ZBED4O75132 1171 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 USP2O75604 605 aaPredicted RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 FLOT1O75955 427 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 EYA4O95677 639 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 TUBB4AP04350 444 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 EPHA7Q15375 998 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms