RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 MAP3K14Q99558 947 aa6.9□□□□□ -1.3
NUP98-208ENST00000461047 MDFIQ99750 246 aa6.9□□□□□ -1.3
NUP98-208ENST00000461047 TMEM47Q9BQJ4 181 aa6.9□□□□□ -1.3
NUP98-208ENST00000461047 UPF3BQ9BZI7 483 aaKnown RBP6.9□□□□□ -1.3
NUP98-208ENST00000461047 VCPKMTQ9H867 229 aa6.9□□□□□ -1.3
NUP98-208ENST00000461047 ZCCHC17Q9NP64 241 aaKnown RBP6.9□□□□□ -1.3
NUP98-208ENST00000461047 PRDM6Q9NQX0 595 aa6.9□□□□□ -1.3
NUP98-208ENST00000461047 IL17RBQ9NRM6 502 aa6.9□□□□□ -1.3
NUP98-208ENST00000461047 RBM28Q9NW13 759 aaKnown RBP6.9□□□□□ -1.3
NUP98-208ENST00000461047 LIMCH1Q9UPQ0 1083 aa6.9□□□□□ -1.3
NUP98-208ENST00000461047 ADAMTSL1Q8N6G6 1762 aa6.9□□□□□ -1.31
NUP98-208ENST00000461047 ECM29Q5VYK3 1845 aa6.9□□□□□ -1.31
NUP98-208ENST00000461047 MYO5AQ9Y4I1 1855 aaKnown RBP6.9□□□□□ -1.31
NUP98-208ENST00000461047 A0A0G2JLL6 359 aaPredicted RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 KLF18A0A0U1RQI7 1052 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 SMIM22K7EJ46 135 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 K7ELQ4 463 aaPredicted RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 ZBTB43O43298 467 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 NMT2O60551 498 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 CDKL5O76039 1030 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 HSP90AA1P07900 732 aaKnown RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 NFKB1P19838 968 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 GUCY1A2P33402 732 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 CHRNA4P43681 627 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 ARSDP51689 593 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 HMGCS2P54868 508 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 KIF23Q02241 960 aaPredicted RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 BECN1Q14457 450 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 COG2Q14746 738 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 SEC23AQ15436 765 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 PRRT2Q7Z6L0 340 aaPredicted RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 ANKRD23Q86SG2 305 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 RASAL3Q86YV0 1011 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 CCAR1Q8IX12 1150 aaKnown RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 ZNF654Q8IZM8 581 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 LRRC47Q8N1G4 583 aaKnown RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 ZNF274Q96GC6 653 aaPredicted RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 C12orf42Q96LP6 360 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 NACC1Q96RE7 527 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 GSX2Q9BZM3 304 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 TANGO6Q9C0B7 1094 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 SLKQ9H2G2 1235 aaPredicted RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 LY9Q9HBG7 655 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
NUP98-208ENST00000461047 FEM1BQ9UK73 627 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 SLC45A1Q9Y2W3 748 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 KIF3AQ9Y496 699 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 SSC5DA1L4H1 1573 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 PAPPA2Q9BXP8 1791 aa6.89□□□□□ -1.31
NUP98-208ENST00000461047 NAV1Q8NEY1 1877 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 WDR33Q9C0J8 1336 aaKnown RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 GOLGA8AA7E2F4 631 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 GOLGA8BA8MQT2 603 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 TMEM232C9JQI7 657 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 KLRF2D3W0D1 207 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 PLA2G6O60733 806 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 ADAM23O75077 832 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 ZBED4O75132 1171 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 FLOT1O75955 427 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 SMARCA1P28370 1054 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 HOXA7P31268 230 aaPredicted RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 TM4SF4P48230 202 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 GCLCP48506 637 aaPredicted RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 NOVP48745 357 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 METAP2P50579 478 aaKnown RBP eCLIP6.88□□□□□ -1.31
NUP98-208ENST00000461047 STAT2P52630 851 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 ANTXR2P58335 489 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 JAG1P78504 1218 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 MAP2K1Q02750 393 aaPredicted RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 ARHGEF6Q15052 776 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 SWI5Q1ZZU3 235 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 SIAH1Q8IUQ4 282 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 HSCBQ8IWL3 235 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 SPICE1Q8N0Z3 855 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 MB21D1Q8N884 522 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 PRPF38AQ8NAV1 312 aaKnown RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 FANCBQ8NB91 859 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 ACER1Q8TDN7 264 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 SMCR8Q8TEV9 937 aaPredicted RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 PARK7Q99497 189 aaKnown RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 LRRC2Q9BYS8 371 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 RPAP3Q9H6T3 665 aaPredicted RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 ZFYVE28Q9HCC9 887 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 JPH1Q9HDC5 661 aaPredicted RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 SEC63Q9UGP8 760 aaKnown RBP6.88□□□□□ -1.31
NUP98-208ENST00000461047 SLC6A14Q9UN76 642 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 AGTPBP1Q9UPW5 1226 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 STARD13Q9Y3M8 1113 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 TACC3Q9Y6A5 838 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 TAF6LQ9Y6J9 622 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 MYH1P12882 1939 aa6.88□□□□□ -1.31
NUP98-208ENST00000461047 MYPNQ86TC9 1320 aa6.87□□□□□ -1.31
NUP98-208ENST00000461047 A0A1W2PRG0 241 aa6.87□□□□□ -1.31
NUP98-208ENST00000461047 FAM155AB1AL88 458 aaPredicted RBP6.87□□□□□ -1.31
NUP98-208ENST00000461047 PDHXO00330 501 aa6.87□□□□□ -1.31
NUP98-208ENST00000461047 CA12O43570 354 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms