RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 SDF4Q9BRK5 362 aa20.93■□□□□ 0.94
DDR1-241ENST00000460944 PRKAG2Q9UGJ0 569 aa20.93■□□□□ 0.94
DDR1-241ENST00000460944 PPFIA4O75335 1185 aa20.92■□□□□ 0.94
DDR1-241ENST00000460944 CIITAP33076 1130 aa20.92■□□□□ 0.94
DDR1-241ENST00000460944 USP11P51784 963 aa20.92■□□□□ 0.94
DDR1-241ENST00000460944 PSMC6P62333 389 aa20.92■□□□□ 0.94
DDR1-241ENST00000460944 SP4Q02446 784 aa20.92■□□□□ 0.94
DDR1-241ENST00000460944 TLE2Q04725 743 aa20.92■□□□□ 0.94
DDR1-241ENST00000460944 SAFBQ15424 915 aaKnown RBP eCLIP20.92■□□□□ 0.94
DDR1-241ENST00000460944 KRT40Q6A162 431 aa20.92■□□□□ 0.94
DDR1-241ENST00000460944 KATNAL1Q9BW62 490 aa20.92■□□□□ 0.94
DDR1-241ENST00000460944 DCDC2CA8MYV0 355 aa20.91■□□□□ 0.94
DDR1-241ENST00000460944 FAM86B1E9PN63 330 aa20.91■□□□□ 0.94
DDR1-241ENST00000460944 TLR3O15455 904 aaKnown RBP20.91■□□□□ 0.94
DDR1-241ENST00000460944 ATP9AO75110 1047 aa20.91■□□□□ 0.94
DDR1-241ENST00000460944 MMP1P03956 469 aa20.91■□□□□ 0.94
DDR1-241ENST00000460944 FAM86B2P0C5J1 330 aa20.91■□□□□ 0.94
DDR1-241ENST00000460944 ARP10275 920 aa20.91■□□□□ 0.94
DDR1-241ENST00000460944 PRR16Q569H4 304 aa20.91■□□□□ 0.94
DDR1-241ENST00000460944 PRPF38BQ5VTL8 546 aaKnown RBP20.91■□□□□ 0.94
DDR1-241ENST00000460944 TOX2Q96NM4 488 aa20.91■□□□□ 0.94
DDR1-241ENST00000460944 AGO4Q9HCK5 861 aaKnown RBP20.91■□□□□ 0.94
DDR1-241ENST00000460944 NFASCO94856 1347 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 IGLV3-22A0A075B6J6 115 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 ZNF286BP0CG31 522 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 HOXD8P13378 290 aaPredicted RBP20.9■□□□□ 0.94
DDR1-241ENST00000460944 CHMP4BP1P59074 171 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 INF2Q27J81 1249 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 PIK3AP1Q6ZUJ8 805 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 ANKRD33Q7Z3H0 272 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 DIS3L2Q8IYB7 885 aaKnown RBP20.9■□□□□ 0.94
DDR1-241ENST00000460944 OXER1Q8TDS5 423 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 GPR20Q99678 358 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 BCAS3Q9H6U6 928 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 JPH1Q9HDC5 661 aaPredicted RBP20.9■□□□□ 0.94
DDR1-241ENST00000460944 PRDM5Q9NQX1 630 aaPredicted RBP20.9■□□□□ 0.94
DDR1-241ENST00000460944 TCEAL9Q9UHQ7 104 aa20.9■□□□□ 0.94
DDR1-241ENST00000460944 ZMYND8Q9ULU4 1186 aaPredicted RBP20.9■□□□□ 0.94
DDR1-241ENST00000460944 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.9■□□□□ 0.94
DDR1-241ENST00000460944 H0YGN5 161 aa20.89■□□□□ 0.93
DDR1-241ENST00000460944 CLTBP09497 229 aa20.89■□□□□ 0.93
DDR1-241ENST00000460944 CDK7P50613 346 aa20.89■□□□□ 0.93
DDR1-241ENST00000460944 FAM47CQ5HY64 1035 aa20.89■□□□□ 0.93
DDR1-241ENST00000460944 NEK8Q86SG6 692 aa20.89■□□□□ 0.93
DDR1-241ENST00000460944 SLC43A3Q8NBI5 491 aa20.89■□□□□ 0.93
DDR1-241ENST00000460944 ZNF577Q9BSK1 485 aa20.89■□□□□ 0.93
DDR1-241ENST00000460944 SLC9A2Q9UBY0 812 aa20.89■□□□□ 0.93
DDR1-241ENST00000460944 F2P00734 622 aa20.88■□□□□ 0.93
DDR1-241ENST00000460944 GUCY1B3Q02153 619 aa20.88■□□□□ 0.93
DDR1-241ENST00000460944 NR5A1Q13285 461 aa20.88■□□□□ 0.93
DDR1-241ENST00000460944 NBPF20Q3BBV1 942 aa20.88■□□□□ 0.93
DDR1-241ENST00000460944 NFRKBQ6P4R8 1299 aa20.88■□□□□ 0.93
DDR1-241ENST00000460944 MOXD1Q6UVY6 613 aa20.88■□□□□ 0.93
DDR1-241ENST00000460944 SEPT1Q8WYJ6 367 aa20.88■□□□□ 0.93
DDR1-241ENST00000460944 NAP1L4Q99733 375 aaKnown RBP20.88■□□□□ 0.93
DDR1-241ENST00000460944 ZNF215Q9UL58 517 aaPredicted RBP20.88■□□□□ 0.93
DDR1-241ENST00000460944 GRIN2DO15399 1336 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 IPO5O00410 1097 aaKnown RBP20.87■□□□□ 0.93
DDR1-241ENST00000460944 LGALS2P05162 132 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 SYN1P17600 705 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 PSEN2P49810 448 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 PTPN11Q06124 597 aaPredicted RBP20.87■□□□□ 0.93
DDR1-241ENST00000460944 ITGB3BPQ13352 177 aaPredicted RBP20.87■□□□□ 0.93
DDR1-241ENST00000460944 GNL2Q13823 731 aaKnown RBP20.87■□□□□ 0.93
DDR1-241ENST00000460944 MFSD10Q14728 455 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 LETM2Q2VYF4 491 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 UTP14CQ5TAP6 766 aaKnown RBP20.87■□□□□ 0.93
DDR1-241ENST00000460944 FAM126BQ8IXS8 530 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 KAT2BQ92831 832 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 PDLIM7Q9NR12 457 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 TBC1D22BQ9NU19 505 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 SMC3Q9UQE7 1217 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 KAT6AQ92794 2004 aa20.87■□□□□ 0.93
DDR1-241ENST00000460944 BTBD18B2RXH4 712 aa20.86■□□□□ 0.93
DDR1-241ENST00000460944 TDP2O95551 362 aa20.86■□□□□ 0.93
DDR1-241ENST00000460944 GCFC2P16383 781 aaKnown RBP20.86■□□□□ 0.93
DDR1-241ENST00000460944 TCF7P36402 384 aaPredicted RBP20.86■□□□□ 0.93
DDR1-241ENST00000460944 KIAA0753Q2KHM9 967 aa20.86■□□□□ 0.93
DDR1-241ENST00000460944 Q4G0T1 1027 aa20.86■□□□□ 0.93
DDR1-241ENST00000460944 FBXO18Q8NFZ0 1043 aa20.86■□□□□ 0.93
DDR1-241ENST00000460944 TMEM39AQ9NV64 488 aa20.86■□□□□ 0.93
DDR1-241ENST00000460944 DDX39AO00148 427 aaKnown RBP20.85■□□□□ 0.93
DDR1-241ENST00000460944 GJB2P29033 226 aa20.85■□□□□ 0.93
DDR1-241ENST00000460944 FAAP100Q0VG06 881 aa20.85■□□□□ 0.93
DDR1-241ENST00000460944 C7orf31Q8N865 590 aa20.85■□□□□ 0.93
DDR1-241ENST00000460944 TNFRSF25Q93038 417 aa20.85■□□□□ 0.93
DDR1-241ENST00000460944 LENG9Q96B70 501 aa20.85■□□□□ 0.93
DDR1-241ENST00000460944 C16orf70Q9BSU1 422 aa20.85■□□□□ 0.93
DDR1-241ENST00000460944 DDX25Q9UHL0 483 aaKnown RBP20.85■□□□□ 0.93
DDR1-241ENST00000460944 CYP3A7-CYP3A51PA0A087WV96 503 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 GSTTP1A0A1W2PQM5 241 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 H3BRB1 525 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 HAS3O00219 553 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 MSH4O15457 936 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 EDIL3O43854 480 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 CCNT1O60563 726 aaKnown RBP20.84■□□□□ 0.93
DDR1-241ENST00000460944 SUPT20HL2P0C7V6 817 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 CYP3A7P24462 503 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 ACTR2P61160 394 aa20.84■□□□□ 0.93
DDR1-241ENST00000460944 UIMC1Q96RL1 719 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms