RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 INHAP05111 366 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 ZNF865P0CJ78 1059 aaPredicted RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 ARP10275 920 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CYBAP13498 195 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CPT1AP50416 773 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 FXR2P51116 673 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CACNB2Q08289 660 aaPredicted RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 FOXD4L6Q3SYB3 417 aaPredicted RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CELF3Q5SZQ8 465 aaKnown RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 MAP3K21Q5TCX8 1036 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 HAUS3Q68CZ6 603 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 TAPT1Q6NXT6 567 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 MIS18BP1Q6P0N0 1132 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 FAM173BQ6P4H8 233 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CCDC62Q6P9F0 684 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 FOXD4L3Q6VB84 417 aaPredicted RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CLEC17AQ6ZS10 378 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CYP2W1Q8TAV3 490 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 ETNPPLQ8TBG4 499 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 NEK9Q8TD19 979 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 EMID1Q96A84 441 aaPredicted RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CCDC34Q96HJ3 373 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 SLC9A2Q9UBY0 812 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 CLIC4Q9Y696 253 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 DOCK3Q8IZD9 2030 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 ELP1O95163 1332 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 CUTAO60888 179 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 RGS20O76081 388 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 GGPS1O95749 300 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 PSAPP07602 524 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 PPP2R5CQ13362 524 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 FAM160B1Q5W0V3 765 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 KRT79Q5XKE5 535 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 ARRDC4Q8NCT1 418 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 LENG9Q96B70 501 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 KATNBL1Q9H079 304 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 LRWD1Q9UFC0 647 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 SAMM50Q9Y512 469 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 MYH7BA7E2Y1 1941 aa13.9□□□□□ -0.18
HDAC4-206ENST00000460235 PPFIA4O75335 1185 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 PSMD10O75832 226 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 KCNA2P16389 499 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 MUTP22033 750 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
HDAC4-206ENST00000460235 UBA7P41226 1012 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 ADCYAP1R1P41586 468 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 PTPAQ15257 358 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 CYFIP1Q7L576 1253 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 MIER3Q7Z3K6 550 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 RNF180Q86T96 592 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 C4orf32Q8N8J7 132 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 PCSK9Q8NBP7 692 aaKnown RBP13.89□□□□□ -0.19
HDAC4-206ENST00000460235 OR6J1Q8NGC5 347 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 PPTC7Q8NI37 304 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 LEO1Q8WVC0 666 aaPredicted RBP13.89□□□□□ -0.19
HDAC4-206ENST00000460235 SEPT1Q8WYJ6 367 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 CDK5RAP3Q96JB5 506 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 SPATA33Q96N06 139 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 AZI2Q9H6S1 392 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 CCDC39Q9UFE4 941 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 DDX20Q9UHI6 824 aaKnown RBP13.89□□□□□ -0.19
HDAC4-206ENST00000460235 PCDHA10Q9Y5I2 948 aa13.89□□□□□ -0.19
HDAC4-206ENST00000460235 VWA3AA6NCI4 1184 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 DYNC1LI2O43237 492 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-206ENST00000460235 EDIL3O43854 480 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 TECP42680 631 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 SLC26A2P50443 739 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 NBR1Q14596 966 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 EPHA7Q15375 998 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 DGKDQ16760 1214 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 LY6KQ17RY6 165 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 PRAMEF19Q5SWL8 479 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 ADALQ6DHV7 355 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 TLK2Q86UE8 772 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 HAS1Q92839 578 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 ZFP91Q96JP5 570 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-206ENST00000460235 TMEM106CQ9BVX2 250 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 NT5C3AQ9H0P0 336 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 TMEM60Q9H2L4 133 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 PDGFCQ9NRA1 345 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 DISC1Q9NRI5 854 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 PKD2L1Q9P0L9 805 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 ZNF215Q9UL58 517 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-206ENST00000460235 KDM3AQ9Y4C1 1321 aa13.88□□□□□ -0.19
HDAC4-206ENST00000460235 FARP2O94887 1054 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-206ENST00000460235 P4HBP07237 508 aaKnown RBP13.87□□□□□ -0.19
HDAC4-206ENST00000460235 SMPD1P17405 629 aa13.87□□□□□ -0.19
HDAC4-206ENST00000460235 MARCKSP29966 332 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-206ENST00000460235 CAP1Q01518 475 aa13.87□□□□□ -0.19
HDAC4-206ENST00000460235 IGSF22Q8N9C0 903 aa13.87□□□□□ -0.19
HDAC4-206ENST00000460235 ARMC5Q96C12 935 aa13.87□□□□□ -0.19
HDAC4-206ENST00000460235 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC4-206ENST00000460235 SMARCAD1Q9H4L7 1026 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms