RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 MAP2K7O14733 419 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 CYP2C19P33261 490 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 CASP5P51878 434 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 FAM193AP78312 1265 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 JAG1P78504 1218 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 EHBP1Q8NDI1 1231 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 CYP2W1Q8TAV3 490 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 SALL4Q9UJQ4 1053 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 A0A1W2PQJ5 194 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 USO1O60763 962 aaKnown RBP20.07■□□□□ 0.8
HPS3-202ENST00000460120 MAGEA1P43355 309 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 SEMA3FQ13275 785 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 EZH2Q15910 746 aaKnown RBP20.07■□□□□ 0.8
HPS3-202ENST00000460120 PAPD7Q5XG87 772 aaKnown RBP20.07■□□□□ 0.8
HPS3-202ENST00000460120 HHIPL2Q6UWX4 724 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 DNAAF5Q86Y56 855 aa20.07■□□□□ 0.8
HPS3-202ENST00000460120 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.07■□□□□ 0.8
HPS3-202ENST00000460120 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
HPS3-202ENST00000460120 F5H6K3 240 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 FKBP3Q00688 224 aaKnown RBP20.06■□□□□ 0.8
HPS3-202ENST00000460120 KLRC3Q07444 240 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 FAN1Q9Y2M0 1017 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 ONECUT3O60422 494 aaPredicted RBP20.06■□□□□ 0.8
HPS3-202ENST00000460120 CHRNA5P30532 468 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 EPS15P42566 896 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 USP14P54578 494 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 UBXN2AP68543 259 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 ARHGAP4P98171 946 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 PTPROQ16827 1216 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 CCDC84Q86UT8 332 aaPredicted RBP20.06■□□□□ 0.8
HPS3-202ENST00000460120 SIAH1Q8IUQ4 282 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 CCDC65Q8IXS2 484 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 BAP1Q92560 729 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 SUGT1Q9Y2Z0 365 aa20.06■□□□□ 0.8
HPS3-202ENST00000460120 MEIS2O14770 477 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 CYP11B2P19099 503 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 ALDH1B1P30837 517 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 EHHADHQ08426 723 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 RAPGEF1Q13905 1077 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 HNRNPLLQ8WVV9 542 aaKnown RBP20.05■□□□□ 0.8
HPS3-202ENST00000460120 LRRC27Q9C0I9 530 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 TULP1O00294 542 aaPredicted RBP20.05■□□□□ 0.8
HPS3-202ENST00000460120 ECE2O60344 883 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 TACC1O75410 805 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 GH2P01242 217 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 MYBL2P10244 700 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 AOC3Q16853 763 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 SCFD1Q8WVM8 642 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 SH2D4AQ9H788 454 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 EMILIN3Q9NT22 766 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.05■□□□□ 0.8
HPS3-202ENST00000460120 ADAM21Q9UKJ8 722 aa20.05■□□□□ 0.8
HPS3-202ENST00000460120 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.05■□□□□ 0.8
HPS3-202ENST00000460120 SFI1A8K8P3 1242 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 SLC7A5Q01650 507 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 COBLL1Q53SF7 1204 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 ARSHQ5FYA8 562 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 FIGNQ5HY92 759 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 PDXDC1Q6P996 788 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 CATSPER3Q86XQ3 398 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 NT5C3AQ9H0P0 336 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 PI4KBQ9UBF8 816 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 RSPH10B2B2RC85 870 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 FAM86B1E9PN63 330 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 CHMP2AO43633 222 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 NDUFB10O96000 172 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 FAM86B2P0C5J1 330 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 RSPH10BP0C881 870 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 ACTN1P12814 892 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 GCFC2P16383 781 aaKnown RBP20.04■□□□□ 0.8
HPS3-202ENST00000460120 PSMD2Q13200 908 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 ADAM9Q13443 819 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 ZYXQ15942 572 aaKnown RBP20.04■□□□□ 0.8
HPS3-202ENST00000460120 ABCB5Q2M3G0 1257 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 NLGN1Q8N2Q7 840 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 HDAC7Q8WUI4 952 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 RIN2Q8WYP3 895 aaPredicted RBP20.04■□□□□ 0.8
HPS3-202ENST00000460120 IKZF4Q9H2S9 585 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 SPDYE3A6NKU9 549 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 RNASE9P60153 205 aaKnown RBP20.04■□□□□ 0.8
HPS3-202ENST00000460120 KCTD19Q17RG1 926 aaPredicted RBP20.04■□□□□ 0.8
HPS3-202ENST00000460120 MTMR8Q96EF0 704 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 CCDC17Q96LX7 622 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 ZDHHC15Q96MV8 337 aa20.04■□□□□ 0.8
HPS3-202ENST00000460120 KDM3AQ9Y4C1 1321 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 PDE6BP35913 854 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 ZNF76P36508 570 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 GPS2Q13227 327 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 ZCWPW2Q504Y3 356 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 FAM83BQ5T0W9 1011 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 FAM133AQ8N9E0 248 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 MASTLQ96GX5 879 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 MYH7BA7E2Y1 1941 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 EIF3JO75822 258 aaKnown RBP20.03■□□□□ 0.8
HPS3-202ENST00000460120 PRPF6O94906 941 aaKnown RBP20.03■□□□□ 0.8
HPS3-202ENST00000460120 APBA3O96018 575 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 CKAP4Q07065 602 aaKnown RBP20.03■□□□□ 0.8
HPS3-202ENST00000460120 FBXO11Q86XK2 927 aa20.03■□□□□ 0.8
HPS3-202ENST00000460120 MS4A14Q96JA4 679 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms