RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 GPBP1L1Q9HC44 474 aaPredicted RBP9.59□□□□□ -0.87
SHROOM4-203ENST00000460112 IQANK1A0A1B0GTG1 560 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 M0R2C6 588 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 H2AFZP0C0S5 128 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 TFAP4Q01664 338 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 ADAM9Q13443 819 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 H2AFVQ71UI9 128 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 TSC22D3Q99576 134 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 TCP10Q12799 353 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 TAF1BQ53T94 588 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 MYLK4Q86YV6 388 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 KCTD6Q8NC69 237 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 WDR11Q9BZH6 1224 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 PNMA3Q9UL41 463 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 COPG1Q9Y678 874 aaKnown RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 ALAS1P13196 640 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 PSMC2P35998 433 aaKnown RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 LRRC8AQ8IWT6 810 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 DNAAF3Q8N9W5 541 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 RNF139Q8WU17 664 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 DIS3Q9Y2L1 958 aaKnown RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 ZFXP17010 805 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 CMA1P23946 247 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 PSMD7P51665 324 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 MED21Q13503 144 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 KRT80Q6KB66 452 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 PLA2G4DQ86XP0 818 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 RAB42Q8N4Z0 105 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 FAM89AQ96GI7 184 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 OSBPL3Q9H4L5 887 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 NDE1Q9NXR1 346 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 MEIS1O00470 390 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 HGSO14964 777 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 OCM2P0CE71 109 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 OCMP0CE72 109 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 SCG2P13521 617 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 PAPOLAP51003 745 aaKnown RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 TTC19Q6DKK2 380 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 ZNF654Q8IZM8 581 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 SCG3Q8WXD2 468 aaKnown RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 SUGCTQ9HAC7 445 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 DEPDC1BQ8WUY9 529 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 TRIM62Q9BVG3 475 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 LMBRD1Q9NUN5 540 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 TRIM33Q9UPN9 1127 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 RFX7Q2KHR2 1363 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 USP19O94966 1318 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 RPN1P04843 607 aaKnown RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 RECQLP46063 649 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 WASHC5Q12768 1159 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 GIMAP8Q8ND71 665 aaPredicted RBP9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 SCOCQ9UIL1 159 aa9.58□□□□□ -0.88
SHROOM4-203ENST00000460112 QRICH2Q9H0J4 1663 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 PRPSAP2O60256 369 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 YWHAHQ04917 246 aaPredicted RBP9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 SUPT20HL1Q3ZLR7 823 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 SPOPLQ6IQ16 392 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 DHTKD1Q96HY7 919 aaPredicted RBP9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 CCDC17Q96LX7 622 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 MAGEB5Q9BZ81 275 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 GCP02774 474 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 MCF2P10911 925 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 ATICP31939 592 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 KIAA1755Q5JYT7 1200 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 ACBD5Q5T8D3 534 aaPredicted RBP9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 OLFML3Q9NRN5 406 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 ARHGEF9O43307 516 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 SOX5P35711 763 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 LIG3P49916 1009 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 ABCB5Q2M3G0 1257 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 PBKQ96KB5 322 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 AMNQ9BXJ7 453 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 PAIP2BQ9ULR5 123 aaKnown RBP9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 ATP10BO94823 1461 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 EEF1B2P24534 225 aaKnown RBP9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 EPHB1P54762 984 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 GPR162Q16538 588 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 MCUQ8NE86 351 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 SNX19Q92543 992 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 NINQ8N4C6 2090 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 MAPK4P31152 587 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 CEBPAP49715 358 aaPredicted RBP9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 PNOCQ13519 176 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 DNAJC24Q6P3W2 148 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 EPAS1Q99814 870 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 TBC1D19Q8N5T2 526 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 BCL2L12Q9HB09 334 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 NLRC4Q9NPP4 1024 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 CHCHD3Q9NX63 227 aaKnown RBP9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 CDC23Q9UJX2 597 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 H3BRJ5 948 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 KRT1P04264 644 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 GNAT1P11488 350 aa9.57□□□□□ -0.88
SHROOM4-203ENST00000460112 TRIM59Q8IWR1 403 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms