RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
SCNM1-203ENST00000459799 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
SCNM1-203ENST00000459799 ATF7P17544 494 aaPredicted RBP10.64□□□□□ -0.71
SCNM1-203ENST00000459799 CHST3Q7LGC8 479 aa10.64□□□□□ -0.71
SCNM1-203ENST00000459799 ZNF444Q8N0Y2 327 aaPredicted RBP10.64□□□□□ -0.71
SCNM1-203ENST00000459799 MPHOSPH6Q99547 160 aaKnown RBP10.64□□□□□ -0.71
SCNM1-203ENST00000459799 BOLA2Q9H3K6 86 aa10.64□□□□□ -0.71
SCNM1-203ENST00000459799 ATRXP46100 2492 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 MYO10Q9HD67 2058 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 HOXD8P13378 290 aaPredicted RBP10.63□□□□□ -0.71
SCNM1-203ENST00000459799 HOXC8P31273 242 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 SLC16A2P36021 539 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 NRIP1P48552 1158 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 PPP2R3CQ969Q6 453 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 EMID1Q96A84 441 aaPredicted RBP10.63□□□□□ -0.71
SCNM1-203ENST00000459799 HAUS7Q99871 368 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 ZNF287Q9HBT7 754 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 PLAGL2Q9UPG8 496 aa10.63□□□□□ -0.71
SCNM1-203ENST00000459799 BRD1O95696 1058 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 ITGB1P05556 798 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 CTSHP09668 335 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 ATP5JP18859 108 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 RBM10P98175 930 aaKnown RBP10.62□□□□□ -0.71
SCNM1-203ENST00000459799 TTBK2Q6IQ55 1244 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 BTNL9Q6UXG8 535 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 SEPT14Q6ZU15 432 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 DHX37Q8IY37 1157 aaKnown RBP10.62□□□□□ -0.71
SCNM1-203ENST00000459799 CLASRPQ8N2M8 674 aaKnown RBP10.62□□□□□ -0.71
SCNM1-203ENST00000459799 VN1R2Q8NFZ6 395 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 PPTC7Q8NI37 304 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 APBB2Q92870 758 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 P2RX5Q93086 422 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 ZNF689Q96CS4 500 aaPredicted RBP10.62□□□□□ -0.71
SCNM1-203ENST00000459799 PLVAPQ9BX97 442 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 STX8Q9UNK0 236 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 PCDHGC5Q9Y5F6 944 aa10.62□□□□□ -0.71
SCNM1-203ENST00000459799 NMT2O60551 498 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 IFIT2P09913 472 aaKnown RBP10.61□□□□□ -0.71
SCNM1-203ENST00000459799 TDO2P48775 406 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 TFAP4Q01664 338 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 MTMR3Q13615 1198 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 CCDC96Q2M329 555 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 SYDE2Q5VT97 1194 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 ASTLQ6HA08 431 aaPredicted RBP10.61□□□□□ -0.71
SCNM1-203ENST00000459799 ZBTB33Q86T24 672 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
SCNM1-203ENST00000459799 KREMEN2Q8NCW0 462 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 SPPL3Q8TCT6 385 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 ATP8B4Q8TF62 1192 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 OSBP2Q969R2 916 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 SMOC2Q9H3U7 446 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 IL17RBQ9NRM6 502 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 FANCMQ8IYD8 2048 aa10.61□□□□□ -0.71
SCNM1-203ENST00000459799 WDR19Q8NEZ3 1342 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 B4DLN1 442 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 CAND2O75155 1236 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 SP100P23497 879 aaPredicted RBP10.6□□□□□ -0.71
SCNM1-203ENST00000459799 MRPL12P52815 198 aaKnown RBP10.6□□□□□ -0.71
SCNM1-203ENST00000459799 BTG3Q14201 252 aaPredicted RBP10.6□□□□□ -0.71
SCNM1-203ENST00000459799 LCE2DQ5TA82 110 aaPredicted RBP10.6□□□□□ -0.71
SCNM1-203ENST00000459799 CWF19L1Q69YN2 538 aaKnown RBP10.6□□□□□ -0.71
SCNM1-203ENST00000459799 ZSCAN25Q6NSZ9 544 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 UBALD2Q8IYN6 164 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 KIAA2013Q8IYS2 634 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 DCAF4Q8WV16 495 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 KIF1BPQ96EK5 621 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 DLL3Q9NYJ7 618 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 DDX41Q9UJV9 622 aaKnown RBP10.6□□□□□ -0.71
SCNM1-203ENST00000459799 SORCS3Q9UPU3 1222 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 MTMR7Q9Y216 660 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 MRPL42Q9Y6G3 142 aaKnown RBP10.6□□□□□ -0.71
SCNM1-203ENST00000459799 MYH6P13533 1939 aa10.6□□□□□ -0.71
SCNM1-203ENST00000459799 TREHO43280 583 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 GPAA1O43292 621 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 ARP10275 920 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 RLBP1P12271 317 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 NOVP48745 357 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 PUM1Q14671 1186 aaKnown RBP eCLIP10.59□□□□□ -0.71
SCNM1-203ENST00000459799 HSP90AB4PQ58FF6 505 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 ZKSCAN2Q63HK3 967 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 KLHL23Q8NBE8 558 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 POF1BQ8WVV4 589 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 ATP6V0A1Q93050 837 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 C16orf70Q9BSU1 422 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 COL20A1Q9P218 1284 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.59□□□□□ -0.71
SCNM1-203ENST00000459799 DENND4AQ7Z401 1863 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 DOCK5Q9H7D0 1870 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 PKD1L2Q7Z442 2459 aa10.59□□□□□ -0.71
SCNM1-203ENST00000459799 ANKRD11Q6UB99 2663 aaPredicted RBP10.59□□□□□ -0.71
SCNM1-203ENST00000459799 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.71
SCNM1-203ENST00000459799 FNDC1Q4ZHG4 1894 aaPredicted RBP10.58□□□□□ -0.72
SCNM1-203ENST00000459799 C17orf102A2RUQ5 167 aa10.58□□□□□ -0.72
SCNM1-203ENST00000459799 M0R2C6 588 aa10.58□□□□□ -0.72
SCNM1-203ENST00000459799 DGKIO75912 1065 aa10.58□□□□□ -0.72
SCNM1-203ENST00000459799 SMIM10L2AP0DMW4 78 aa10.58□□□□□ -0.72
SCNM1-203ENST00000459799 SMIM10L2BP0DMW5 78 aa10.58□□□□□ -0.72
SCNM1-203ENST00000459799 LAMC2Q13753 1193 aa10.58□□□□□ -0.72
SCNM1-203ENST00000459799 HSDL1Q3SXM5 330 aa10.58□□□□□ -0.72
SCNM1-203ENST00000459799 NAALADL2Q58DX5 795 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms