RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 RAPGEF1Q13905 1077 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 TTMPQ5BVD1 217 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 TRAPPC3LQ5T215 181 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 CCDC84Q86UT8 332 aaPredicted RBP15.62■□□□□ 0.09
SCFD1-203ENST00000458591 FAM133AQ8N9E0 248 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 IFT81Q8WYA0 676 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 ALS2CR12Q96Q35 445 aa15.62■□□□□ 0.09
SCFD1-203ENST00000458591 A0A087X0T9 212 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 MPHOSPH10O00566 681 aaKnown RBP15.61■□□□□ 0.09
SCFD1-203ENST00000458591 PJA2O43164 708 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 FAM228BP0C875 321 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 PPP1R2P41236 205 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 NOVP48745 357 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 SCNN1DP51172 638 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 CASP5P51878 434 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 PDIA5Q14554 519 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 FAM26FQ5R3K3 315 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 FAM76AQ8TAV0 307 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 TSG101Q99816 390 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 STIM2Q9P246 746 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 ADAMTS1Q9UHI8 967 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 GGA1Q9UJY5 639 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 NFU1Q9UMS0 254 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 IL1R1P14778 569 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 IRAK1P51617 712 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 GUCY2FP51841 1108 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 SFMBT2Q5VUG0 894 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 C8orf74Q6P047 294 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 NOX5Q96PH1 765 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 PCDHA12Q9UN75 941 aa15.61■□□□□ 0.09
SCFD1-203ENST00000458591 MEIS1O00470 390 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 KRT14P02533 472 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 TCP1P17987 556 aaKnown RBP15.6■□□□□ 0.09
SCFD1-203ENST00000458591 PSMC6P62333 389 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 FKBP3Q00688 224 aaKnown RBP15.6■□□□□ 0.09
SCFD1-203ENST00000458591 HERC4Q5GLZ8 1057 aaPredicted RBP15.6■□□□□ 0.09
SCFD1-203ENST00000458591 IQCEQ6IPM2 695 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 SLC30A10Q6XR72 485 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 TBC1D16Q8TBP0 767 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 SCFD1Q8WVM8 642 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 RIC8AQ9NPQ8 531 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 PCDHA2Q9Y5H9 948 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 PRLRP16471 622 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 CCT5P48643 541 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 CLK2P49760 499 aaKnown RBP15.6■□□□□ 0.09
SCFD1-203ENST00000458591 ZNF543Q08ER8 600 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 ZNF572Q7Z3I7 529 aaPredicted RBP15.6■□□□□ 0.09
SCFD1-203ENST00000458591 ZFPM1Q8IX07 1006 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 ZIM3Q96PE6 472 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 KRT12Q99456 494 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 P2RX7Q99572 595 aaKnown RBP15.6■□□□□ 0.09
SCFD1-203ENST00000458591 IKZF4Q9H2S9 585 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 EPB41L5Q9HCM4 733 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 PCDHAC2Q9Y5I4 1007 aa15.6■□□□□ 0.09
SCFD1-203ENST00000458591 PNMA6FA0A0J9YX94 578 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 POTEFA5A3E0 1075 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 PPFIA4O75335 1185 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 MED24O75448 989 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 PLA2G4BP0C869 781 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 SNHG28P0DPA3 235 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 SLC9A1P19634 815 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 SMARCA1P28370 1054 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 PAFAH1B1P43034 410 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 ATP1A2P50993 1020 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 GUCY2DQ02846 1103 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 GABPAQ06546 454 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 SLC9C1Q4G0N8 1177 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 ARSHQ5FYA8 562 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 CCDC70Q6NSX1 233 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 POTEGQ6S5H5 508 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 GPBP1Q86WP2 473 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 CERS5Q8N5B7 392 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 EFCC1Q9HA90 598 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 EP400Q96L91 3159 aa15.59■□□□□ 0.09
SCFD1-203ENST00000458591 FGFR1OPO95684 399 aaKnown RBP15.58■□□□□ 0.09
SCFD1-203ENST00000458591 CACNB3P54284 484 aa15.58■□□□□ 0.09
SCFD1-203ENST00000458591 RAB34Q9BZG1 259 aa15.58■□□□□ 0.09
SCFD1-203ENST00000458591 PSTPIP2Q9H939 334 aa15.58■□□□□ 0.09
SCFD1-203ENST00000458591 CEP72Q9P209 647 aa15.58■□□□□ 0.09
SCFD1-203ENST00000458591 SAMM50Q9Y512 469 aa15.58■□□□□ 0.09
SCFD1-203ENST00000458591 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.58■□□□□ 0.09
SCFD1-203ENST00000458591 AHDC1Q5TGY3 1603 aaPredicted RBP15.58■□□□□ 0.08
SCFD1-203ENST00000458591 GAKO14976 1311 aa15.58■□□□□ 0.08
SCFD1-203ENST00000458591 IGKV6D-41A0A0C4DH26 115 aa15.58■□□□□ 0.08
SCFD1-203ENST00000458591 HEXIM1O94992 359 aaKnown RBP15.58■□□□□ 0.08
SCFD1-203ENST00000458591 GNGT1P63211 74 aa15.58■□□□□ 0.08
SCFD1-203ENST00000458591 ASPRV1Q53RT3 343 aa15.58■□□□□ 0.08
SCFD1-203ENST00000458591 PACS2Q86VP3 889 aa15.58■□□□□ 0.08
SCFD1-203ENST00000458591 ATP6V0A2Q9Y487 856 aa15.58■□□□□ 0.08
SCFD1-203ENST00000458591 COL24A1Q17RW2 1714 aa15.58■□□□□ 0.08
SCFD1-203ENST00000458591 SSU72P8A0A1W2PR75 194 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 SERPING1P05155 500 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 CYP11B2P19099 503 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 SHMT1P34896 483 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 PSMD2Q13200 908 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 ADAM9Q13443 819 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms