RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 MEIS2O14770 477 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 TBX3O15119 743 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 POLR2DO15514 142 aaKnown RBP10.08□□□□□ -0.8
VPS50-207ENST00000458530 EVI5O60447 810 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 SMC2O95347 1197 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 UBA7P41226 1012 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 UBXN2AP68543 259 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 ARHGAP4P98171 946 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 IRF5Q13568 498 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 COG2Q14746 738 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 GPAT2Q6NUI2 795 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 CKAP2LQ8IYA6 745 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 MB21D1Q8N884 522 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 C4orf32Q8N8J7 132 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 FUCA2Q9BTY2 467 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 COL25A1Q9BXS0 654 aaPredicted RBP10.08□□□□□ -0.8
VPS50-207ENST00000458530 FBXO28Q9NVF7 368 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 HOXC10Q9NYD6 342 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
VPS50-207ENST00000458530 CYP3A7-CYP3A51PA0A087WV96 503 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 WNT7AO00755 349 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 ADAMTS3O15072 1205 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 CFBP00751 764 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 MYL1P05976 194 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 CYP3A4P08684 503 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 SLFN14P0C7P3 912 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 CYP3A7P24462 503 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 ZNF76P36508 570 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 SNAP25P60880 206 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 SETQ01105 290 aaPredicted RBP10.07□□□□□ -0.8
VPS50-207ENST00000458530 GHRHRQ02643 423 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 MFSD10Q14728 455 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 USP17L6PQ6QN14 398 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 CATSPERGQ6ZRH7 1159 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 FASTKD5Q7L8L6 764 aaKnown RBP10.07□□□□□ -0.8
VPS50-207ENST00000458530 GAS2L3Q86XJ1 694 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 DEFB123Q8N688 67 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 FAM200AQ8TCP9 573 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 CALML4Q96GE6 196 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 CDK5RAP3Q96JB5 506 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 DACH1Q9UI36 760 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 GABRQQ9UN88 632 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 KDM3AQ9Y4C1 1321 aa10.07□□□□□ -0.8
VPS50-207ENST00000458530 MGAMO43451 1857 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 VWA5AO00534 786 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 ATP2A1O14983 1001 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 TDP2O95551 362 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 ALAS1P13196 640 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 CIITAP33076 1130 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 COPB2P35606 906 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 STAT6P42226 847 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 HSD17B4P51659 736 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 FCGRTP55899 365 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 IRX3P78415 501 aaPredicted RBP10.06□□□□□ -0.8
VPS50-207ENST00000458530 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.8
VPS50-207ENST00000458530 GRIN1Q05586 938 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 SEMA3FQ13275 785 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 PDIA5Q14554 519 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 POSTNQ15063 836 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 Q4G0T1 1027 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 RRAGBQ5VZM2 374 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 CPXCR1Q8N123 301 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 TRIML1Q8N9V2 468 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 GTF3C2Q8WUA4 911 aaPredicted RBP10.06□□□□□ -0.8
VPS50-207ENST00000458530 SMARCE1Q969G3 411 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 CCDC47Q96A33 483 aaKnown RBP10.06□□□□□ -0.8
VPS50-207ENST00000458530 DHX58Q96C10 678 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 FAM20AQ96MK3 541 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 MBOAT7Q96N66 472 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 TEX13BQ9BXU2 312 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 GTPBP4Q9BZE4 634 aaKnown RBP10.06□□□□□ -0.8
VPS50-207ENST00000458530 TMEM60Q9H2L4 133 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 DISC1Q9NRI5 854 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 ZNF536O15090 1300 aa10.06□□□□□ -0.8
VPS50-207ENST00000458530 A0A0G2JLL6 359 aaPredicted RBP10.05□□□□□ -0.8
VPS50-207ENST00000458530 OPLAHO14841 1288 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 ACTN4O43707 911 aaKnown RBP10.05□□□□□ -0.8
VPS50-207ENST00000458530 ADCY3O60266 1144 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 INHAP05111 366 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 TXKP42681 527 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 FLT3LGP49771 235 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 TPM4P67936 248 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 LONRF3Q496Y0 759 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 ANO6Q4KMQ2 910 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 SPECC1Q5M775 1068 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 KRT79Q5XKE5 535 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 HAUS3Q68CZ6 603 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 GADL1Q6ZQY3 521 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 Q7L0L9 218 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 PRRT2Q7Z6L0 340 aaPredicted RBP10.05□□□□□ -0.8
VPS50-207ENST00000458530 CABP7Q86V35 215 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 FCHSD1Q86WN1 690 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 PDILTQ8N807 584 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 IGSF22Q8N9C0 903 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 ANKLE1Q8NAG6 615 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 ATG4CQ96DT6 458 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 EPSTI1Q96J88 318 aa10.05□□□□□ -0.8
VPS50-207ENST00000458530 AGBL1Q96MI9 1066 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms