RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 TUT1Q9H6E5 874 aaKnown RBP12.24□□□□□ -0.45
DDX39A-203ENST00000454233 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-203ENST00000454233 BARHL2Q9NY43 387 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 CXXC1Q9P0U4 656 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-203ENST00000454233 MSRAQ9UJ68 235 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 SLC4A7Q9Y6M7 1214 aa12.24□□□□□ -0.45
DDX39A-203ENST00000454233 SMCO2A6NFE2 343 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 GRXCR1A8MXD5 290 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 STXBP3O00186 592 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 PARNO95453 639 aaKnown RBP12.23□□□□□ -0.45
DDX39A-203ENST00000454233 SELPP16109 830 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 AKAP17AQ02040 695 aaKnown RBP12.23□□□□□ -0.45
DDX39A-203ENST00000454233 SP4Q02446 784 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 MTMR1Q13613 665 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 LRRC8DQ7L1W4 858 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 CTAGE1Q96RT6 745 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 CDX2Q99626 313 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-203ENST00000454233 GPR20Q99678 358 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 PBX4Q9BYU1 374 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 ZNF215Q9UL58 517 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-203ENST00000454233 UBIAD1Q9Y5Z9 338 aa12.23□□□□□ -0.45
DDX39A-203ENST00000454233 C17orf102A2RUQ5 167 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 MAFGO15525 162 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 SCG2P13521 617 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 ITGB5P18084 799 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 RBL2Q08999 1139 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 AP3B2Q13367 1082 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-203ENST00000454233 UTP14CQ5TAP6 766 aaKnown RBP12.22□□□□□ -0.45
DDX39A-203ENST00000454233 TYW1BQ6NUM6 668 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 RUFY3Q7L099 469 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 SLC17A8Q8NDX2 589 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 CCDC12Q8WUD4 166 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-203ENST00000454233 DHX38Q92620 1227 aaKnown RBP12.22□□□□□ -0.45
DDX39A-203ENST00000454233 ANO3Q9BYT9 981 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 ZNF576Q9H609 170 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 JADE2Q9NQC1 790 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 CYP46A1Q9Y6A2 500 aa12.22□□□□□ -0.45
DDX39A-203ENST00000454233 NID2Q14112 1375 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 PRPF3O43395 683 aaKnown RBP12.21□□□□□ -0.45
DDX39A-203ENST00000454233 ATP9AO75110 1047 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 SMIM10L2AP0DMW4 78 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 SMIM10L2BP0DMW5 78 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 GNAT1P11488 350 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 CKBP12277 381 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 KCNA2P16389 499 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 ATP2A2P16615 1042 aaKnown RBP12.21□□□□□ -0.45
DDX39A-203ENST00000454233 PBX2P40425 430 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 ZNF200P98182 395 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-203ENST00000454233 MCTP2Q6DN12 878 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 MYLIPQ8WY64 445 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 SEPT1Q8WYJ6 367 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 ATP6V0A1Q93050 837 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 VWCEQ96DN2 955 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 PGBD1Q96JS3 809 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 MXRA8Q9BRK3 442 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 ZSWIM6Q9HCJ5 1215 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 C6orf50Q9HD87 102 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 PKD2L1Q9P0L9 805 aa12.21□□□□□ -0.45
DDX39A-203ENST00000454233 SCN5AQ14524 2016 aa12.21□□□□□ -0.46
DDX39A-203ENST00000454233 TRIP12Q14669 1992 aaPredicted RBP12.21□□□□□ -0.46
DDX39A-203ENST00000454233 TANC1Q9C0D5 1861 aa12.21□□□□□ -0.46
DDX39A-203ENST00000454233 ESYT2A0FGR8 921 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 BAIAP3O94812 1187 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 FOSL2P15408 326 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 PDIA3P30101 505 aaKnown RBP12.2□□□□□ -0.46
DDX39A-203ENST00000454233 TCF7P36402 384 aaPredicted RBP12.2□□□□□ -0.46
DDX39A-203ENST00000454233 ZNF76P36508 570 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 SERINC5Q86VE9 423 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 TRIM50Q86XT4 487 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 SLC9A7Q96T83 725 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 RNF26Q9BY78 433 aaPredicted RBP12.2□□□□□ -0.46
DDX39A-203ENST00000454233 TM6SF1Q9BZW5 370 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 NKX2-4Q9H2Z4 354 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 SLC28A3Q9HAS3 691 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 TMEM260Q9NX78 707 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 PCDHA11Q9Y5I1 949 aa12.2□□□□□ -0.46
DDX39A-203ENST00000454233 DOCK5Q9H7D0 1870 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 IFNAR1P17181 557 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 GNA11P29992 359 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 HOXC8P31273 242 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 SREBF1P36956 1147 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 THPOP40225 353 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 KCNJ6P48051 423 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
DDX39A-203ENST00000454233 EVCP57679 992 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
DDX39A-203ENST00000454233 HIC1Q14526 733 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 GRIN2CQ14957 1233 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 TRIM71Q2Q1W2 868 aaKnown RBP12.19□□□□□ -0.46
DDX39A-203ENST00000454233 CEP55Q53EZ4 464 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 ZNF618Q5T7W0 954 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 JAKMIP3Q5VZ66 844 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 CNKSR3Q6P9H4 555 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 TRIM22Q8IYM9 498 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 CCDC148Q8NFR7 591 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 PHOSPHO2Q8TCD6 241 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms