RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SPEF1Q9Y4P9 236 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 C22orf46C9J442 243 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 ULK1O75385 1050 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 FPR2P25090 351 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 NEK2P51955 445 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 KPNA1P52294 538 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 JAM2P57087 298 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 ERVK-21P61565 698 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 SPIRE1Q08AE8 756 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 IKZF1Q13422 519 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 ATP13A4Q4VNC1 1196 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 RALGPS1Q5JS13 557 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 MROH9Q5TGP6 573 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 ATG4DQ86TL0 474 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 CBARPQ8N350 705 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 CISD2Q8N5K1 135 aaKnown RBP5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 ANKS4BQ8N8V4 417 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 SH3RF2Q8TEC5 729 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 TRMT2BQ96GJ1 504 aaKnown RBP5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 SCYL1Q96KG9 808 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 ALPK1Q96QP1 1244 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 KCNJ15Q99712 375 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 BOCQ9BWV1 1114 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 PDGFDQ9GZP0 370 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 OXSMQ9NWU1 459 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 MARCH2Q9P0N8 246 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 ACSL6Q9UKU0 697 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 TRHDEQ9UKU6 1024 aa5.07□□□□□ -1.6
HMGB1P15-201ENST00000453854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 SLC12A8A0AV02 714 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 TGM5O43548 720 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 NRDCO43847 1150 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 PRKD3O94806 890 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 GNAT1P11488 350 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 RTP1P59025 263 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 PHC1P78364 1004 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 ZNF124Q15973 351 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 HSF5Q4G112 596 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 HSP90AB2PQ58FF8 381 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 ANGEL2Q5VTE6 544 aaKnown RBP5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 ARHGAP36Q6ZRI8 547 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 C11orf74Q86VG3 221 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 NOSTRINQ8IVI9 506 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 TEX2Q8IWB9 1127 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 FAM168AQ92567 244 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 SYTL4Q96C24 671 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 MTMR8Q96EF0 704 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 CAMKK2Q96RR4 588 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 SP110Q9HB58 689 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 SLC6A20Q9NP91 592 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 H2AFY2Q9P0M6 372 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 FBLN5Q9UBX5 448 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 TCEAL9Q9UHQ7 104 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 TMEM59LQ9UK28 342 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 SPO11Q9Y5K1 396 aa5.06□□□□□ -1.6
HMGB1P15-201ENST00000453854 ARID1BQ8NFD5 2236 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 TNKSO95271 1327 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 PLEKHD1A6NEE1 506 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 BIN1O00499 593 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 MAN2B1O00754 1011 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 DVL2O14641 736 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 NKRFO15226 690 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 AKAP10O43572 662 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 TSPAN6O43657 245 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 USP2O75604 605 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 DGKIO75912 1065 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 FBXO21O94952 628 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 FUCA1P04066 466 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 RAB27AP51159 221 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 SESN3P58005 492 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 MVKQ03426 396 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 CHRNEQ04844 493 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 ZP2Q05996 745 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 NR0B2Q15466 257 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 EMC4Q5J8M3 183 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 GPR158Q5T848 1215 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 IQSEC1Q6DN90 963 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 CYP4F22Q6NT55 531 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 GALNT18Q6P9A2 607 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 LZTR1Q8N653 840 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 CLRN3Q8NCR9 226 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 PDZD8Q8NEN9 1154 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 SLC5A5Q92911 643 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 RELTQ969Z4 430 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 CHMP4CQ96CF2 233 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 C8orf48Q96LL4 319 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 PSMD1Q99460 953 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 VTA1Q9NP79 307 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 PDLIM7Q9NR12 457 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 GEMIN8Q9NWZ8 242 aaKnown RBP5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 BTG4Q9NY30 223 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 SLAMF8Q9P0V8 285 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 COA3Q9Y2R0 106 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 RWDD3Q9Y3V2 267 aa5.05□□□□□ -1.6
HMGB1P15-201ENST00000453854 E2F8A0AVK6 867 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 SHTN1A0MZ66 631 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 CLASP2O75122 1294 aaKnown RBP5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 TADA3O75528 432 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms