RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 BAG4O95429 457 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 TDP2O95551 362 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 ASGR1P07306 291 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 KCNA2P16389 499 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 IRX5P78411 483 aaPredicted RBP16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 DGKDQ16760 1214 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 PPTC7Q8NI37 304 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 AFG1LQ8WV93 481 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 VTI1AQ96AJ9 217 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 PAWRQ96IZ0 340 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 SENP6Q9GZR1 1112 aaPredicted RBP16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 C11orf49Q9H6J7 331 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 TCEAL9Q9UHQ7 104 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 MYH7BA7E2Y1 1941 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 FRMPD3Q5JV73 1810 aa16.56■□□□□ 0.24
NCKIPSD-207ENST00000453349 STX6O43752 255 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 PPFIA4O75335 1185 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 CABYRO75952 493 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 MYL3P08590 195 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 ACLYP53396 1101 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 CCSAPQ6IQ19 270 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 MBOAT7Q96N66 472 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 BCAS3Q9H6U6 928 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 SLC9A2Q9UBY0 812 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 DAXXQ9UER7 740 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 PHF24Q9UPV7 400 aa16.55■□□□□ 0.24
NCKIPSD-207ENST00000453349 MSH4O15457 936 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 MMP3P08254 477 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 MNX1P50219 401 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 SP4Q02446 784 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 HSDL1Q3SXM5 330 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 DIS3LQ8TF46 1054 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 SEPT1Q8WYJ6 367 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 LENG9Q96B70 501 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 FAM20AQ96MK3 541 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 GLT1D1Q96MS3 346 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 UIMC1Q96RL1 719 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 JPH1Q9HDC5 661 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 HTTP42858 3142 aa16.54■□□□□ 0.24
NCKIPSD-207ENST00000453349 A0A1W2PQ45 241 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 A0A1W2PQY0 241 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 DDX39AO00148 427 aaKnown RBP16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 TBX3O15119 743 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 SLC37A4O43826 429 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 MCM7P33993 719 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 ZNF174Q15697 407 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 RILPL1Q5EBL4 403 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 TTC38Q5R3I4 469 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 BRAPQ7Z569 592 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 RIT2Q99578 217 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 GPR20Q99678 358 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 TEKT3Q9BXF9 490 aa16.53■□□□□ 0.24
NCKIPSD-207ENST00000453349 DHX15O43143 795 aaKnown RBP16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 GAS7O60861 476 aa16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 COL6A1P12109 1028 aa16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 PURAQ00577 322 aaKnown RBP16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 ORC2Q13416 577 aaPredicted RBP16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 LRCH2Q5VUJ6 765 aa16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 CXCL17Q6UXB2 119 aa16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 SLFN12Q8IYM2 578 aa16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 SLC5A5Q92911 643 aa16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 MTG1Q9BT17 334 aaPredicted RBP16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 STARD7Q9NQZ5 370 aa16.52■□□□□ 0.24
NCKIPSD-207ENST00000453349 ELP1O95163 1332 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 NEMFO60524 1076 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 KRT76Q01546 638 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 CALCRLQ16602 461 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 ZNF746Q6NUN9 644 aaPredicted RBP16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 SLC39A5Q6ZMH5 540 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 FERMT3Q86UX7 667 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 HTATIP2Q9BUP3 242 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 KATNAL1Q9BW62 490 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 MTMR6Q9Y217 621 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 SAMM50Q9Y512 469 aa16.51■□□□□ 0.23
NCKIPSD-207ENST00000453349 GSTTP1A0A1W2PQM5 241 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 PSMD10O75832 226 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 TCF7P36402 384 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 RGS19P49795 217 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 TOB1P50616 345 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 ACTR2P61160 394 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 UTP14CQ5TAP6 766 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 MIS18BP1Q6P0N0 1132 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 SMAP1Q8IYB5 467 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 SEZ6LQ9BYH1 1024 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 AZI2Q9H6S1 392 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 KCNMB3Q9NPA1 279 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 PCDHA12Q9UN75 941 aa16.5■□□□□ 0.23
NCKIPSD-207ENST00000453349 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-207ENST00000453349 WNT7AO00755 349 aa16.49■□□□□ 0.23
NCKIPSD-207ENST00000453349 ATG7O95352 703 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms