RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 KRT25Q7Z3Z0 450 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 FBXO16Q8IX29 292 aaPredicted RBP17.84■□□□□ 0.45
VCX3B-204ENST00000453306 FOXP1Q9H334 677 aaPredicted RBP17.84■□□□□ 0.45
VCX3B-204ENST00000453306 BCAS3Q9H6U6 928 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 UBIAD1Q9Y5Z9 338 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 MYH6P13533 1939 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 VPS37CA5D8V6 355 aaPredicted RBP17.83■□□□□ 0.44
VCX3B-204ENST00000453306 MYADML2A6NDP7 307 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 H3BQV1 296 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 ARVCFO00192 962 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 ARIH2O95376 493 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 FOSL2P15408 326 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 CDK7P50613 346 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 EPHB4P54760 987 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 TNFAIP2Q03169 654 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 FAM173BQ6P4H8 233 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 TMEM199Q8N511 208 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 MYLIPQ8WY64 445 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 COL25A1Q9BXS0 654 aaPredicted RBP17.83■□□□□ 0.44
VCX3B-204ENST00000453306 TTYH1Q9H313 450 aaPredicted RBP17.83■□□□□ 0.44
VCX3B-204ENST00000453306 TBX21Q9UL17 535 aa17.83■□□□□ 0.44
VCX3B-204ENST00000453306 IGLV3-22A0A075B6J6 115 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 LOC102724159A0A0B4J2E5 919 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.82■□□□□ 0.44
VCX3B-204ENST00000453306 RBM47A0AV96 593 aaKnown RBP17.82■□□□□ 0.44
VCX3B-204ENST00000453306 ZEB2O60315 1214 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 EIF3JO75822 258 aaKnown RBP17.82■□□□□ 0.44
VCX3B-204ENST00000453306 CABYRO75952 493 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 TDP2O95551 362 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 CCND2P30279 289 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 CIITAP33076 1130 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 NKX3-2P78367 333 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 SP2Q02086 613 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 PDE4DQ08499 809 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 NBR1Q14596 966 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 NONOQ15233 471 aaKnown RBP eCLIP17.82■□□□□ 0.44
VCX3B-204ENST00000453306 PWP2Q15269 919 aaKnown RBP17.82■□□□□ 0.44
VCX3B-204ENST00000453306 STXBP2Q15833 593 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 FOXD4L5Q5VV16 416 aaPredicted RBP17.82■□□□□ 0.44
VCX3B-204ENST00000453306 MCTP1Q6DN14 999 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 NOSTRINQ8IVI9 506 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 FOXD4L4Q8WXT5 416 aaPredicted RBP17.82■□□□□ 0.44
VCX3B-204ENST00000453306 LENG9Q96B70 501 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 MBOAT7Q96N66 472 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 INPP4AQ96PE3 977 aaPredicted RBP17.82■□□□□ 0.44
VCX3B-204ENST00000453306 UIMC1Q96RL1 719 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 SEZ6LQ9BYH1 1024 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 WDR11Q9BZH6 1224 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 TELO2Q9Y4R8 837 aa17.82■□□□□ 0.44
VCX3B-204ENST00000453306 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
VCX3B-204ENST00000453306 MEIS1O00470 390 aa17.81■□□□□ 0.44
VCX3B-204ENST00000453306 ARP10275 920 aa17.81■□□□□ 0.44
VCX3B-204ENST00000453306 PDCP20941 246 aa17.81■□□□□ 0.44
VCX3B-204ENST00000453306 IRX5P78411 483 aaPredicted RBP17.81■□□□□ 0.44
VCX3B-204ENST00000453306 SAFBQ15424 915 aaKnown RBP eCLIP17.81■□□□□ 0.44
VCX3B-204ENST00000453306 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
VCX3B-204ENST00000453306 CCDC62Q6P9F0 684 aa17.81■□□□□ 0.44
VCX3B-204ENST00000453306 MXRA8Q9BRK3 442 aa17.81■□□□□ 0.44
VCX3B-204ENST00000453306 AP5M1Q9H0R1 490 aa17.81■□□□□ 0.44
VCX3B-204ENST00000453306 UNC80Q8N2C7 3258 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 CYP3A7-CYP3A51PA0A087WV96 503 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 SPATA31C2B4DYI2 1134 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 ATP9AO75110 1047 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 BRD1O95696 1058 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 CYP3A7P24462 503 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 DNAJB2P25686 324 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 USP11P51784 963 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 XRRA1Q6P2D8 792 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 SEPT14Q6ZU15 432 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 CHAMP1Q96JM3 812 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 JADE2Q9NQC1 790 aa17.8■□□□□ 0.44
VCX3B-204ENST00000453306 SLC37A4O43826 429 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 SMPD1P17405 629 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 LETM2Q2VYF4 491 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 CEP55Q53EZ4 464 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 IQSEC1Q6DN90 963 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 PSRC1Q6PGN9 363 aaPredicted RBP17.79■□□□□ 0.44
VCX3B-204ENST00000453306 NEK8Q86SG6 692 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 TLK2Q86UE8 772 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 FAM126BQ8IXS8 530 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 COPS5Q92905 334 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 GJA10Q969M2 543 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 IPO9Q96P70 1041 aaKnown RBP17.79■□□□□ 0.44
VCX3B-204ENST00000453306 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
VCX3B-204ENST00000453306 MTIF3Q9H2K0 278 aaKnown RBP17.79■□□□□ 0.44
VCX3B-204ENST00000453306 VTA1Q9NP79 307 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 Q9Y3F1 56 aa17.79■□□□□ 0.44
VCX3B-204ENST00000453306 ZSCAN22P10073 491 aaPredicted RBP17.78■□□□□ 0.44
VCX3B-204ENST00000453306 ATP2B1P20020 1258 aa17.78■□□□□ 0.44
VCX3B-204ENST00000453306 ICAM3P32942 547 aa17.78■□□□□ 0.44
VCX3B-204ENST00000453306 FSCN1Q16658 493 aaKnown RBP17.78■□□□□ 0.44
VCX3B-204ENST00000453306 LY6KQ17RY6 165 aa17.78■□□□□ 0.44
VCX3B-204ENST00000453306 TIFAQ96CG3 184 aa17.78■□□□□ 0.44
VCX3B-204ENST00000453306 DDX41Q9UJV9 622 aaKnown RBP17.78■□□□□ 0.44
VCX3B-204ENST00000453306 GNEQ9Y223 722 aaKnown RBP17.78■□□□□ 0.44
VCX3B-204ENST00000453306 PCDHB6Q9Y5E3 794 aa17.78■□□□□ 0.44
VCX3B-204ENST00000453306 CSF2RAP15509 400 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms