RNA–Protein interactions for RNA: ENST00000452065.5

HDLBP-224, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-224ENST00000452065 ZEB2O60315 1214 aa12.63□□□□□ -0.39
HDLBP-224ENST00000452065 FARP2O94887 1054 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-224ENST00000452065 HOXD8P13378 290 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-224ENST00000452065 ORC2Q13416 577 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-224ENST00000452065 GNL2Q13823 731 aaKnown RBP12.63□□□□□ -0.39
HDLBP-224ENST00000452065 LETM2Q2VYF4 491 aa12.63□□□□□ -0.39
HDLBP-224ENST00000452065 NECAB2Q7Z6G3 386 aa12.63□□□□□ -0.39
HDLBP-224ENST00000452065 AFG1LQ8WV93 481 aa12.63□□□□□ -0.39
HDLBP-224ENST00000452065 RIT2Q99578 217 aa12.63□□□□□ -0.39
HDLBP-224ENST00000452065 KIF28PB7ZC32 967 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 TBX3O15119 743 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 MSH4O15457 936 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 CCNT1O60563 726 aaKnown RBP12.62□□□□□ -0.39
HDLBP-224ENST00000452065 CABYRO75952 493 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 TDP2O95551 362 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 ASGR1P07306 291 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 MMP3P08254 477 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 PTGS1P23219 599 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 IRX5P78411 483 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-224ENST00000452065 BEX3Q00994 111 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 DGKDQ16760 1214 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 HSDL1Q3SXM5 330 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 CYFIP1Q7L576 1253 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 SLC5A5Q92911 643 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 PAWRQ96IZ0 340 aaKnown RBP12.62□□□□□ -0.39
HDLBP-224ENST00000452065 FAM20AQ96MK3 541 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 SDF4Q9BRK5 362 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 ZNF577Q9BSK1 485 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 BCAS3Q9H6U6 928 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 DDX25Q9UHL0 483 aaKnown RBP12.62□□□□□ -0.39
HDLBP-224ENST00000452065 ELP1O95163 1332 aa12.62□□□□□ -0.39
HDLBP-224ENST00000452065 STX6O43752 255 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 ATG7O95352 703 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 TOB1P50616 345 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-224ENST00000452065 PURAQ00577 322 aaKnown RBP12.61□□□□□ -0.39
HDLBP-224ENST00000452065 ITGB3BPQ13352 177 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-224ENST00000452065 RILPL1Q5EBL4 403 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 C1orf53Q5VUE5 145 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 MCTP1Q6DN14 999 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 BRAPQ7Z569 592 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 ETNPPLQ8TBG4 499 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 GLT1D1Q96MS3 346 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 GPR20Q99678 358 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 C11orf49Q9H6J7 331 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 JPH1Q9HDC5 661 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-224ENST00000452065 KCNMB3Q9NPA1 279 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 SLC9A2Q9UBY0 812 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 NOL7Q9UMY1 257 aaKnown RBP12.61□□□□□ -0.39
HDLBP-224ENST00000452065 MTMR6Q9Y217 621 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 BRCA2P51587 3418 aa12.61□□□□□ -0.39
HDLBP-224ENST00000452065 WDR81Q562E7 1941 aa12.6□□□□□ -0.39
HDLBP-224ENST00000452065 A0A1W2PQ45 241 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-224ENST00000452065 GSTTP1A0A1W2PQM5 241 aa12.6□□□□□ -0.39
HDLBP-224ENST00000452065 A0A1W2PQY0 241 aa12.6□□□□□ -0.39
HDLBP-224ENST00000452065 NOP56O00567 594 aaKnown RBP12.6□□□□□ -0.39
HDLBP-224ENST00000452065 SLC37A4O43826 429 aa12.6□□□□□ -0.39
HDLBP-224ENST00000452065 PSMD10O75832 226 aa12.6□□□□□ -0.39
HDLBP-224ENST00000452065 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-224ENST00000452065 ZNF746Q6NUN9 644 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-224ENST00000452065 SLFN12Q8IYM2 578 aa12.6□□□□□ -0.39
HDLBP-224ENST00000452065 DIS3LQ8TF46 1054 aaKnown RBP12.6□□□□□ -0.39
HDLBP-224ENST00000452065 SEPT1Q8WYJ6 367 aa12.6□□□□□ -0.39
HDLBP-224ENST00000452065 MTG1Q9BT17 334 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-224ENST00000452065 SENP6Q9GZR1 1112 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-224ENST00000452065 ZSCAN16Q9H4T2 348 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-224ENST00000452065 SCN10AQ9Y5Y9 1956 aa12.6□□□□□ -0.39
HDLBP-224ENST00000452065 VPS37CA5D8V6 355 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-224ENST00000452065 WNT7AO00755 349 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 BAG4O95429 457 aaKnown RBP12.59□□□□□ -0.39
HDLBP-224ENST00000452065 KRT76Q01546 638 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 SNX17Q15036 470 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 TTC38Q5R3I4 469 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 B3GNT9Q6UX72 402 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 CXCL17Q6UXB2 119 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 SLC39A5Q6ZMH5 540 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 SMAP1Q8IYB5 467 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-224ENST00000452065 SLC43A3Q8NBI5 491 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 HAS1Q92839 578 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 MTMR9Q96QG7 549 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 C16orf70Q9BSU1 422 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 PKD2L1Q9P0L9 805 aa12.59□□□□□ -0.39
HDLBP-224ENST00000452065 MYH9P35579 1960 aaKnown RBP12.58□□□□□ -0.4
HDLBP-224ENST00000452065 IGKV6D-21A0A0A0MT36 114 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 HAS3O00219 553 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 LAD1O00515 517 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 NEMFO60524 1076 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 GAS7O60861 476 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 LGR5O75473 907 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 CCNE2O96020 404 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 F2P00734 622 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 MYL3P08590 195 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-224ENST00000452065 CDK7P50613 346 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 ACTR2P61160 394 aa12.58□□□□□ -0.4
HDLBP-224ENST00000452065 LRCH2Q5VUJ6 765 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms