RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TNPO2O14787 897 aaKnown RBP21.69■■□□□ 1.06
RPS28-202ENST00000449223 KINO60870 393 aaKnown RBP21.69■■□□□ 1.06
RPS28-202ENST00000449223 TBC1D8O95759 1140 aa21.69■■□□□ 1.06
RPS28-202ENST00000449223 CDC25AP30304 524 aa21.69■■□□□ 1.06
RPS28-202ENST00000449223 SP3Q02447 781 aa21.69■■□□□ 1.06
RPS28-202ENST00000449223 E2F4Q16254 413 aa21.69■■□□□ 1.06
RPS28-202ENST00000449223 TPRNQ4KMQ1 711 aa21.69■■□□□ 1.06
RPS28-202ENST00000449223 CAVIN1Q6NZI2 390 aaKnown RBP21.69■■□□□ 1.06
RPS28-202ENST00000449223 DISC1Q9NRI5 854 aa21.69■■□□□ 1.06
RPS28-202ENST00000449223 POLR2DO15514 142 aaKnown RBP21.68■■□□□ 1.06
RPS28-202ENST00000449223 ATP9AO75110 1047 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 TRPA1O75762 1119 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 RGS2P41220 211 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 CCDC183Q5T5S1 534 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 KRT79Q5XKE5 535 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 CABP7Q86V35 215 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 KCTD17Q8N5Z5 321 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 NPLOC4Q8TAT6 608 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 TRIM47Q96LD4 638 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 CLSTN2Q9H4D0 955 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 VTA1Q9NP79 307 aa21.68■■□□□ 1.06
RPS28-202ENST00000449223 OLFML2BQ68BL8 750 aa21.67■■□□□ 1.06
RPS28-202ENST00000449223 HAUS3Q68CZ6 603 aa21.67■■□□□ 1.06
RPS28-202ENST00000449223 ERMNQ8TAM6 284 aa21.67■■□□□ 1.06
RPS28-202ENST00000449223 APBA2Q99767 749 aa21.67■■□□□ 1.06
RPS28-202ENST00000449223 TINF2Q9BSI4 451 aa21.67■■□□□ 1.06
RPS28-202ENST00000449223 KATNBL1Q9H079 304 aa21.67■■□□□ 1.06
RPS28-202ENST00000449223 CCDC39Q9UFE4 941 aa21.67■■□□□ 1.06
RPS28-202ENST00000449223 KDM3AQ9Y4C1 1321 aa21.67■■□□□ 1.06
RPS28-202ENST00000449223 RBM47A0AV96 593 aaKnown RBP21.66■■□□□ 1.06
RPS28-202ENST00000449223 ACTN4O43707 911 aaKnown RBP21.66■■□□□ 1.06
RPS28-202ENST00000449223 XRCC5P13010 732 aaKnown RBP21.66■■□□□ 1.06
RPS28-202ENST00000449223 MUTP22033 750 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 PSMC4P43686 418 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 KRT76Q01546 638 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 KRBA2Q6ZNG9 492 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 RBM43Q6ZSC3 357 aaKnown RBP21.66■■□□□ 1.06
RPS28-202ENST00000449223 IQUBQ8NA54 791 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 GIMAP8Q8ND71 665 aaPredicted RBP21.66■■□□□ 1.06
RPS28-202ENST00000449223 RDM1Q8NG50 284 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 NUP62CLQ9H1M0 184 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 UNC45AQ9H3U1 944 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 CUEDC2Q9H467 287 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.66■■□□□ 1.06
RPS28-202ENST00000449223 DOCK5Q9H7D0 1870 aa21.66■■□□□ 1.06
RPS28-202ENST00000449223 SNAI1O95863 264 aaPredicted RBP21.65■■□□□ 1.06
RPS28-202ENST00000449223 SLFN14P0C7P3 912 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 RPA1P27694 616 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 KARSQ15046 597 aaKnown RBP21.65■■□□□ 1.06
RPS28-202ENST00000449223 LONRF3Q496Y0 759 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 ZNF746Q6NUN9 644 aaPredicted RBP21.65■■□□□ 1.06
RPS28-202ENST00000449223 SNX29Q8TEQ0 813 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 SDF4Q9BRK5 362 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 ANP32EQ9BTT0 268 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 POLR3CQ9BUI4 534 aaPredicted RBP21.65■■□□□ 1.06
RPS28-202ENST00000449223 WDR81Q562E7 1941 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 EML1O00423 815 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 CTAGE5O15320 804 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 SFNP31947 248 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 SP2Q02086 613 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 GRB10Q13322 594 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 EPHA7Q15375 998 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 TMEM119Q4V9L6 283 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 NAALADL2Q58DX5 795 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 NCAPH2Q6IBW4 605 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 CCDC62Q6P9F0 684 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 SEPT14Q6ZU15 432 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 PDILTQ8N807 584 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 NEK9Q8TD19 979 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 CALML4Q96GE6 196 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 UIMC1Q96RL1 719 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 HSD17B14Q9BPX1 270 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 ARHGAP39Q9C0H5 1083 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 NT5C3AQ9H0P0 336 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 ABHD16BQ9H3Z7 469 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 MAGEF1Q9HAY2 307 aa21.65■■□□□ 1.06
RPS28-202ENST00000449223 UBA1P22314 1058 aaKnown RBP21.64■■□□□ 1.05
RPS28-202ENST00000449223 JAK3P52333 1124 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 MAP2K1Q02750 393 aaPredicted RBP21.64■■□□□ 1.05
RPS28-202ENST00000449223 NEDD9Q14511 834 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 KIF22Q14807 665 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 TAPT1Q6NXT6 567 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 KANK3Q6NY19 840 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 PDXDC2PQ6P474 469 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 FBXO16Q8IX29 292 aaPredicted RBP21.64■■□□□ 1.05
RPS28-202ENST00000449223 SMAP1Q8IYB5 467 aaPredicted RBP21.64■■□□□ 1.05
RPS28-202ENST00000449223 SCFD2Q8WU76 684 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 PNMA5Q96PV4 448 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 STK17AQ9UEE5 414 aa21.64■■□□□ 1.05
RPS28-202ENST00000449223 DDX41Q9UJV9 622 aaKnown RBP21.64■■□□□ 1.05
RPS28-202ENST00000449223 LOXHD1Q8IVV2 1947 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 GPR25O00155 361 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 LETM1O95202 739 aaPredicted RBP21.63■■□□□ 1.05
RPS28-202ENST00000449223 GNRH1P01148 92 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 SPATA31C1P0DKV0 1188 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 PLCG1P19174 1290 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 RRAGBQ5VZM2 374 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 SH3RF1Q7Z6J0 888 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 CNNM3Q8NE01 707 aa21.63■■□□□ 1.05
RPS28-202ENST00000449223 EIF2AK1Q9BQI3 630 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms