RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SMCHD1A6NHR9 2005 aa11.8□□□□□ -0.52
VIPAS39-203ENST00000448935 MYPNQ86TC9 1320 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 IGLV3-22A0A075B6J6 115 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 A0A1B0GTH6 734 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 MSH4O15457 936 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 DDNO94850 711 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 MUTP22033 750 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 HIRAP54198 1017 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 NCAPH2Q6IBW4 605 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 FAM114A1Q8IWE2 563 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 SULF1Q8IWU6 871 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 LRRC15Q8TF66 581 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 ZKSCAN4Q969J2 545 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 AGBL1Q96MI9 1066 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 MED15Q96RN5 788 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 NPDC1Q9NQX5 325 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 SPTLC3Q9NUV7 552 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 LIMA1Q9UHB6 759 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 ZHX2Q9Y6X8 837 aa11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 POLR2AP24928 1970 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-203ENST00000448935 MYMKA6NI61 221 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 PPP1R12BO60237 982 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 OFD1O75665 1012 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 KIF20AO95235 890 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 TPM2P07951 284 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 BCRP11274 1271 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 ALAS1P13196 640 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 CCNE1P24864 410 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 SSTR3P32745 418 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 CLCN6P51797 869 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 SPIRE1Q08AE8 756 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 SPECC1LQ69YQ0 1117 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 FOXR2Q6PJQ5 311 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 CCDC65Q8IXS2 484 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 CPXCR1Q8N123 301 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 NUDT12Q9BQG2 462 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 MAGEC2Q9UBF1 373 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 KIAA1024Q9UPX6 916 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 LOXHD1Q8IVV2 1947 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 RPTORQ8N122 1335 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 LRRC10BA6NIK2 292 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 VWA5AO00534 786 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 PLA2G4BP0C869 781 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 SKILP12757 684 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 TAL1P17542 331 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 EEF1GP26641 437 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 NF2P35240 595 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 COG2Q14746 738 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 NR1I3Q14994 352 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 TKFCQ3LXA3 575 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 CLEC4DQ8WXI8 215 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 TBC1D5Q92609 795 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 P2RX5Q93086 422 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 NAP1L5Q96NT1 182 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 RAVER2Q9HCJ3 691 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 TUFT1Q9NNX1 390 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 VAV3Q9UKW4 847 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 PYCARDQ9ULZ3 195 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 CSADQ9Y600 493 aa11.78□□□□□ -0.52
VIPAS39-203ENST00000448935 SSC5DA1L4H1 1573 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 POTECB2RU33 542 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 KCNJ18B7U540 433 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 MEIS1O00470 390 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 ATMINO43313 823 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 MAP3K7O43318 606 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 GAS7O60861 476 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 TPM1P09493 284 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 IDEP14735 1019 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 KCNJ6P48051 423 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 IREB2P48200 963 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 HMGCS2P54868 508 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 LRMPQ12912 555 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 PPP2R5CQ13362 524 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 KCNJ12Q14500 433 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 HSP90AA4PQ58FG1 418 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 TCP11X2Q5H9J9 407 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 PCNX4Q63HM2 1172 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 XRRA1Q6P2D8 792 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 USP50Q70EL3 339 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 DYMQ7RTS9 669 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 GUF1Q8N442 669 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 NEK9Q8TD19 979 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms