RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 TXKP42681 527 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 ARHGAP1Q07960 439 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 PTPAQ15257 358 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 IL17AQ16552 155 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 CELF3Q5SZQ8 465 aaKnown RBP13.42□□□□□ -0.26
RCL1-208ENST00000448872 SLC5A5Q92911 643 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 CDHR1Q96JP9 859 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
RCL1-208ENST00000448872 RNF208Q9H0X6 261 aa13.42□□□□□ -0.26
RCL1-208ENST00000448872 DDX20Q9UHI6 824 aaKnown RBP13.42□□□□□ -0.26
RCL1-208ENST00000448872 MAFGO15525 162 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 MARCH6O60337 910 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 PSMD10O75832 226 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 FARP2O94887 1054 aaPredicted RBP13.41□□□□□ -0.26
RCL1-208ENST00000448872 CCNE2O96020 404 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 PGK1P00558 417 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 OR52Z1P0C646 297 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 TGFB3P10600 412 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 LRCH2Q5VUJ6 765 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 LHX8Q68G74 356 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 KCNV1Q6PIU1 500 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 DHX37Q8IY37 1157 aaKnown RBP13.41□□□□□ -0.26
RCL1-208ENST00000448872 DEFB118Q96PH6 123 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 PAK6Q9NQU5 681 aaPredicted RBP13.41□□□□□ -0.26
RCL1-208ENST00000448872 VAV3Q9UKW4 847 aa13.41□□□□□ -0.26
RCL1-208ENST00000448872 LRRC37A2A6NM11 1700 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 CTAGE5O15320 804 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 CHMP2AO43633 222 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 GAS7O60861 476 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 DUSP11O75319 330 aaKnown RBP13.4□□□□□ -0.26
RCL1-208ENST00000448872 GH1P01241 217 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 RARBP10826 455 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 NCLP19338 710 aaKnown RBP13.4□□□□□ -0.26
RCL1-208ENST00000448872 MARCKSP29966 332 aaPredicted RBP13.4□□□□□ -0.26
RCL1-208ENST00000448872 ATP2C1P98194 919 aaPredicted RBP13.4□□□□□ -0.26
RCL1-208ENST00000448872 GRIN1Q05586 938 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 HSDL1Q3SXM5 330 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 AFG1LQ8WV93 481 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 TNPO1Q92973 898 aaKnown RBP13.4□□□□□ -0.26
RCL1-208ENST00000448872 ZNF396Q96N95 335 aaPredicted RBP13.4□□□□□ -0.26
RCL1-208ENST00000448872 SENP7Q9BQF6 1050 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 SDF4Q9BRK5 362 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 UNC45AQ9H3U1 944 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 MLXIPQ9HAP2 919 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 JPH1Q9HDC5 661 aaPredicted RBP13.4□□□□□ -0.26
RCL1-208ENST00000448872 XPNPEP3Q9NQH7 507 aa13.4□□□□□ -0.26
RCL1-208ENST00000448872 SYNRGQ9UMZ2 1314 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 TBX3O15119 743 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 TECP42680 631 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
RCL1-208ENST00000448872 BEX3Q00994 111 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 ORC2Q13416 577 aaPredicted RBP13.39□□□□□ -0.27
RCL1-208ENST00000448872 NEDD9Q14511 834 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 METTL7BQ6UX53 244 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 FAM20AQ96MK3 541 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 SPATA33Q96N06 139 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 RIT2Q99578 217 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 TTC12Q9H892 705 aaPredicted RBP13.39□□□□□ -0.27
RCL1-208ENST00000448872 GDPD2Q9HCC8 539 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 DOCK3Q8IZD9 2030 aa13.39□□□□□ -0.27
RCL1-208ENST00000448872 NFASCO94856 1347 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 EML1O00423 815 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 ADAMTS4O75173 837 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 SPIRE1Q08AE8 756 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 LAMC2Q13753 1193 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 SLC39A14Q15043 492 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 GPR20Q99678 358 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 TEKT3Q9BXF9 490 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 SLC9A2Q9UBY0 812 aa13.38□□□□□ -0.27
RCL1-208ENST00000448872 GSTTP1A0A1W2PQM5 241 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 VWA3AA6NCI4 1184 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 POTEMA6NI47 508 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 PP2D1A8MPX8 630 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
RCL1-208ENST00000448872 BAG4O95429 457 aaKnown RBP13.37□□□□□ -0.27
RCL1-208ENST00000448872 C6orf222P0C671 652 aaPredicted RBP13.37□□□□□ -0.27
RCL1-208ENST00000448872 GJA9P57773 515 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 ACTR2P61160 394 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 STK38Q15208 465 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 NCAPH2Q6IBW4 605 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 GIMAP8Q8ND71 665 aaPredicted RBP13.37□□□□□ -0.27
RCL1-208ENST00000448872 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
RCL1-208ENST00000448872 CLIC6Q96NY7 704 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 AP5M1Q9H0R1 490 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
RCL1-208ENST00000448872 FBXO2Q9UK22 296 aaPredicted RBP13.37□□□□□ -0.27
RCL1-208ENST00000448872 PCDHA12Q9UN75 941 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 CEP131Q9UPN4 1083 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 ATP6V1DQ9Y5K8 247 aa13.37□□□□□ -0.27
RCL1-208ENST00000448872 LAD1O00515 517 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 NOP56O00567 594 aaKnown RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 SPTLC2O15270 562 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 MMP3P08254 477 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms