RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 MYSM1Q5VVJ2 828 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 SLC39A5Q6ZMH5 540 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 NIPA1Q7RTP0 329 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 OR6J1Q8NGC5 347 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 MAFAQ8NHW3 353 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-207ENST00000447641 RASGRP4Q8TDF6 673 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 SNX21Q969T3 373 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 SENP7Q9BQF6 1050 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 MXRA8Q9BRK3 442 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 SEMA6BQ9H3T3 888 aa16.12■□□□□ 0.17
SREBF1-207ENST00000447641 TRIM43BA6NCK2 446 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-207ENST00000447641 HOXD8P13378 290 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-207ENST00000447641 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
SREBF1-207ENST00000447641 ITGB8P26012 769 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 CIITAP33076 1130 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 CPT1AP50416 773 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 HMGN5P82970 282 aaKnown RBP16.11■□□□□ 0.17
SREBF1-207ENST00000447641 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 CEP55Q53EZ4 464 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 NLRX1Q86UT6 975 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 CYP2W1Q8TAV3 490 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 BADQ92934 168 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 TRIM43Q96BQ3 446 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-207ENST00000447641 BCAS3Q9H6U6 928 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 ELP1O95163 1332 aa16.11■□□□□ 0.17
SREBF1-207ENST00000447641 DOCK5Q9H7D0 1870 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 IGLV3-22A0A075B6J6 115 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 ZEB2O60315 1214 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 KPNA6O60684 536 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 USP11P51784 963 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
SREBF1-207ENST00000447641 PPTC7Q8NI37 304 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 AFG1LQ8WV93 481 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 TNFRSF25Q93038 417 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 FERMT2Q96AC1 680 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 CDHR1Q96JP9 859 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 GBF1Q92538 1859 aa16.1■□□□□ 0.17
SREBF1-207ENST00000447641 SCN10AQ9Y5Y9 1956 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 FAM86B1E9PN63 330 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 ATP9AO75110 1047 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 CABYRO75952 493 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 GGPS1O95749 300 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 FAM86B2P0C5J1 330 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 KCNA2P16389 499 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 CDK7P50613 346 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 EPHB4P54760 987 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 PURAQ00577 322 aaKnown RBP16.09■□□□□ 0.17
SREBF1-207ENST00000447641 MTMR1Q13613 665 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 CUL4AQ13619 759 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 NEDD9Q14511 834 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 SLC43A3Q8NBI5 491 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 OXER1Q8TDS5 423 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 PRDM5Q9NQX1 630 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-207ENST00000447641 KCNH7Q9NS40 1196 aa16.09■□□□□ 0.17
SREBF1-207ENST00000447641 CYP3A7-CYP3A51PA0A087WV96 503 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 PPFIA4O75335 1185 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 MMP1P03956 469 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 MMP3P08254 477 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 ARP10275 920 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 CYP3A7P24462 503 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 SMAD3P84022 425 aaKnown RBP16.08■□□□□ 0.16
SREBF1-207ENST00000447641 HSDL1Q3SXM5 330 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 BRDTQ58F21 947 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-207ENST00000447641 KRT40Q6A162 431 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 METTL7BQ6UX53 244 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 CXCL17Q6UXB2 119 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 USP38Q8NB14 1042 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-207ENST00000447641 TBCKQ8TEA7 893 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 LENG9Q96B70 501 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 GLT1D1Q96MS3 346 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 POLR3EQ9NVU0 708 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 PRKAG2Q9UGJ0 569 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 GRIN2DO15399 1336 aa16.08■□□□□ 0.16
SREBF1-207ENST00000447641 CYFIP1Q7L576 1253 aa16.07■□□□□ 0.16
SREBF1-207ENST00000447641 FBXO18Q8NFZ0 1043 aa16.07■□□□□ 0.16
SREBF1-207ENST00000447641 SPATA33Q96N06 139 aa16.07■□□□□ 0.16
SREBF1-207ENST00000447641 MBOAT7Q96N66 472 aa16.07■□□□□ 0.16
SREBF1-207ENST00000447641 AGO4Q9HCK5 861 aaKnown RBP16.07■□□□□ 0.16
SREBF1-207ENST00000447641 PRDM6Q9NQX0 595 aa16.07■□□□□ 0.16
SREBF1-207ENST00000447641 STARD7Q9NQZ5 370 aa16.07■□□□□ 0.16
SREBF1-207ENST00000447641 NFASCO94856 1347 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 KRT2P35908 639 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 ZNF76P36508 570 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 NR5A1Q13285 461 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.16
SREBF1-207ENST00000447641 DGKDQ16760 1214 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
SREBF1-207ENST00000447641 MOXD1Q6UVY6 613 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 ANKRD33Q7Z3H0 272 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 PLA2G4DQ86XP0 818 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 KAT2BQ92831 832 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 C8orf76Q96K31 380 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 GPR20Q99678 358 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 MTG1Q9BT17 334 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-207ENST00000447641 SEZ6LQ9BYH1 1024 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 MLXIPQ9HAP2 919 aa16.06■□□□□ 0.16
SREBF1-207ENST00000447641 TELO2Q9Y4R8 837 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms