RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 NECAB2Q7Z6G3 386 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 WDR66Q8TBY9 1149 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 SEC14L1Q92503 715 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 BOCQ9BWV1 1114 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 RNF32Q9H0A6 362 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 AP5M1Q9H0R1 490 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 DSEQ9UL01 958 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 YBX2Q9Y2T7 364 aaKnown RBP6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 SLC12A8A0AV02 714 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 NEMP1O14524 444 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 HGSO14964 777 aaPredicted RBP6□□□□□ -1.45
HMGB1P16-201ENST00000447155 GPR39O43194 453 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 RAB11FIP3O75154 756 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 TADA3O75528 432 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 CYBBP04839 570 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 DBHP09172 617 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 ATP2A2P16615 1042 aaKnown RBP6□□□□□ -1.45
HMGB1P16-201ENST00000447155 ADCYAP1R1P41586 468 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 LSSP48449 732 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 GP2P55259 537 aaKnown RBP6□□□□□ -1.45
HMGB1P16-201ENST00000447155 EVA1CP58658 441 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 FIGNQ5HY92 759 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 PAQR3Q6TCH7 311 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 FERMT3Q86UX7 667 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 PTRH1Q86Y79 214 aaKnown RBP6□□□□□ -1.45
HMGB1P16-201ENST00000447155 SIRT2Q8IXJ6 389 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 NLGN4XQ8N0W4 816 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 PHOSPHO1Q8TCT1 267 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 SH3RF2Q8TEC5 729 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 STAG1Q8WVM7 1258 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 PEX11GQ96HA9 241 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 SMOC1Q9H4F8 434 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 THG1LQ9NWX6 298 aaKnown RBP6□□□□□ -1.45
HMGB1P16-201ENST00000447155 NUDT5Q9UKK9 219 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 SRPK3Q9UPE1 567 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 PHLDB1Q86UU1 1377 aa6□□□□□ -1.45
HMGB1P16-201ENST00000447155 MAN2B1O00754 1011 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 FKBP9O95302 570 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 PDGFRBP09619 1106 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 YBX3P16989 372 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 GALK1P51570 392 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 KPNA1P52294 538 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 IRF9Q00978 393 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 NR1I3Q14994 352 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 LHFPL2Q6ZUX7 228 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 FKBP9P1Q75LS8 142 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 ATG4DQ86TL0 474 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 C11orf74Q86VG3 221 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 SPATS2Q86XZ4 545 aaKnown RBP5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 CHTF18Q8WVB6 975 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 KIRREL1Q96J84 757 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 GPR101Q96P66 508 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 OXSMQ9NWU1 459 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 ZNF652Q9Y2D9 606 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 PCDHB4Q9Y5E5 795 aa5.99□□□□□ -1.45
HMGB1P16-201ENST00000447155 H7C1D1 291 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 CLASP2O75122 1294 aaKnown RBP5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 MPOP05164 745 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 ZBTB48P10074 688 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 ID4P47928 161 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 GUCY2FP51841 1108 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 ATP13A4Q4VNC1 1196 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 FYB2Q5VWT5 728 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 CREB3L3Q68CJ9 461 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 KCTD1Q719H9 257 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 CBLL1Q75N03 491 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 NOSTRINQ8IVI9 506 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 TRIM48Q8IWZ4 208 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 EFHBQ8N7U6 833 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 INTS4Q96HW7 963 aaKnown RBP5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 SCYL1Q96KG9 808 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 CEP89Q96ST8 783 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 ANP32EQ9BTT0 268 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 SLC6A17Q9H1V8 727 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 ZFP64Q9NPA5 681 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 SLC5A4Q9NY91 659 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 MYOTQ9UBF9 498 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 ASH2LQ9UBL3 628 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 ATP23Q9Y6H3 246 aa5.98□□□□□ -1.45
HMGB1P16-201ENST00000447155 ZC3H12DA2A288 527 aaKnown RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 F8W031 263 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 KCNK3O14649 394 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 SLC27A2O14975 620 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 SGSM2O43147 1006 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 HIP1RO75146 1068 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 KRT37O76014 449 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 ZBTB7AO95365 584 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 GJA4P35212 333 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 EPHA5P54756 1037 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 TMPRSS15P98073 1019 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 EXOSC10Q01780 885 aaKnown RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 TMEM62Q0P6H9 643 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 TUSC3Q13454 348 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 FAM50AQ14320 339 aaKnown RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 ZNF174Q15697 407 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 PLEKHG6Q3KR16 790 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 BRDTQ58F21 947 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 MILR1Q7Z6M3 343 aa5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P16-201ENST00000447155 PASD1Q8IV76 773 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms