RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 TOGARAM2Q6ZUX3 1019 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 ESR2Q92731 530 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 RPAP3Q9H6T3 665 aaPredicted RBP14.5□□□□□ -0.09
DDX56-206ENST00000446987 PUF60Q9UHX1 559 aaKnown RBP14.5□□□□□ -0.09
DDX56-206ENST00000446987 GPR25O00155 361 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 MYO1FO00160 1098 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 SNUPNO95149 360 aaKnown RBP14.5□□□□□ -0.09
DDX56-206ENST00000446987 YEATS4O95619 227 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 SEC23AQ15436 765 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 FILIP1LQ4L180 1135 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 SPECC1LQ69YQ0 1117 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 LPAR1Q92633 364 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 PARK7Q99497 189 aaKnown RBP14.5□□□□□ -0.09
DDX56-206ENST00000446987 NUP88Q99567 741 aaPredicted RBP14.5□□□□□ -0.09
DDX56-206ENST00000446987 CRACR2AQ9BSW2 395 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 CNNM2Q9H8M5 875 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 MYO6Q9UM54 1294 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 SYNPO2Q9UMS6 1093 aa14.5□□□□□ -0.09
DDX56-206ENST00000446987 GOLGA6L7A0A1B0GV03 622 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 F5H6K3 240 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 OPA1O60313 960 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 MYBL2P10244 700 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 ME1P48163 572 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 CCNHP51946 323 aaPredicted RBP14.49□□□□□ -0.09
DDX56-206ENST00000446987 KLRC3Q07444 240 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 CDCA2Q69YH5 1023 aaPredicted RBP14.49□□□□□ -0.09
DDX56-206ENST00000446987 CATSPERGQ6ZRH7 1159 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 ENAHQ8N8S7 591 aaPredicted RBP14.49□□□□□ -0.09
DDX56-206ENST00000446987 C3orf20Q8ND61 904 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 GMCL1P1Q8NEA9 526 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 KCNG4Q8TDN1 519 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 ZNF296Q8WUU4 475 aaPredicted RBP14.49□□□□□ -0.09
DDX56-206ENST00000446987 USP28Q96RU2 1077 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 NAPGQ99747 312 aaPredicted RBP14.49□□□□□ -0.09
DDX56-206ENST00000446987 TMEM47Q9BQJ4 181 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 KRT23Q9C075 422 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 SH2D4AQ9H788 454 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 SLC24A3Q9HC58 644 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 ZFYVE28Q9HCC9 887 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 CPA4Q9UI42 421 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 STX8Q9UNK0 236 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 PLXNB2O15031 1838 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 TNKSO95271 1327 aa14.49□□□□□ -0.09
DDX56-206ENST00000446987 SPDYE16A6NNV3 312 aaPredicted RBP14.48□□□□□ -0.09
DDX56-206ENST00000446987 WDR46O15213 610 aaKnown RBP14.48□□□□□ -0.09
DDX56-206ENST00000446987 RHOXF2BP0C7M4 288 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 CTGFP29279 349 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 NT5C2P49902 561 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 GNGT1P63211 74 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 SLC5A9Q2M3M2 681 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 P2RX7Q99572 595 aaKnown RBP14.48□□□□□ -0.09
DDX56-206ENST00000446987 RHOXF2Q9BQY4 288 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 SENP2Q9HC62 589 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 TXNRD2Q9NNW7 524 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 FBXO28Q9NVF7 368 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 PCDHA7Q9UN72 937 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 ADGRG1Q9Y653 693 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L15C9J2P7 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L13C9JLJ4 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L11C9JVI0 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L18D6R9N7 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L22D6RA61 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L17D6RBQ6 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L19D6RCP7 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L20D6RJB6 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 CNMDO75829 334 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 PECAM1P16284 738 aaPredicted RBP14.48□□□□□ -0.09
DDX56-206ENST00000446987 FECHP22830 423 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 HERVK_113P62684 666 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 USP17L24Q0WX57 530 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 FAM83BQ5T0W9 1011 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 ELOA2Q8IYF1 753 aaPredicted RBP14.48□□□□□ -0.09
DDX56-206ENST00000446987 ANKS1AQ92625 1134 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 BORCS6Q96GS4 357 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 GOPCQ9HD26 462 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 DOCK3Q8IZD9 2030 aa14.48□□□□□ -0.09
DDX56-206ENST00000446987 AGPSO00116 658 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 ATP1A3P13637 1013 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 GGCXP38435 758 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 LBX2Q6XYB7 198 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 CHST3Q7LGC8 479 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 NCOA7Q8NI08 942 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 RSRC1Q96IZ7 334 aaKnown RBP14.47□□□□□ -0.09
DDX56-206ENST00000446987 ZSCAN10Q96SZ4 725 aaPredicted RBP14.47□□□□□ -0.09
DDX56-206ENST00000446987 ZSWIM4Q9H7M6 989 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 MRPL44Q9H9J2 332 aaKnown RBP14.47□□□□□ -0.09
DDX56-206ENST00000446987 GPHNQ9NQX3 736 aaPredicted RBP14.47□□□□□ -0.09
DDX56-206ENST00000446987 CPSF2Q9P2I0 782 aaKnown RBP14.47□□□□□ -0.09
DDX56-206ENST00000446987 DDX20Q9UHI6 824 aaKnown RBP14.47□□□□□ -0.09
DDX56-206ENST00000446987 PNMA3Q9UL41 463 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 CENPFP49454 3210 aa14.47□□□□□ -0.09
DDX56-206ENST00000446987 NDUFAB1O14561 156 aa14.46□□□□□ -0.09
DDX56-206ENST00000446987 LIN7AO14910 233 aaPredicted RBP14.46□□□□□ -0.09
DDX56-206ENST00000446987 AMPD2Q01433 879 aa14.46□□□□□ -0.09
DDX56-206ENST00000446987 PABPC4Q13310 644 aaKnown RBP eCLIP14.46□□□□□ -0.092e-6■■□□□ 12.6
DDX56-206ENST00000446987 PARP9Q8IXQ6 854 aa14.46□□□□□ -0.09
DDX56-206ENST00000446987 P3H4Q92791 437 aa14.46□□□□□ -0.09
DDX56-206ENST00000446987 GMCL1Q96IK5 515 aa14.46□□□□□ -0.09
DDX56-206ENST00000446987 ARHGAP39Q9C0H5 1083 aa14.46□□□□□ -0.09
DDX56-206ENST00000446987 RBPJLQ9UBG7 517 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms