RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 PPP4R1Q8TF05 950 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 TGS1Q96RS0 853 aaKnown RBP5.57□□□□□ -1.52
SCN11A-202ENST00000444237 ANKIB1Q9P2G1 1089 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 PCDHA13Q9Y5I0 950 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 RTL9Q8NET4 1388 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 CCDC22O60826 627 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 ATP1A1P05023 1023 aaKnown RBP5.57□□□□□ -1.52
SCN11A-202ENST00000444237 CCDC166P0CW27 439 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 TNFAIP3P21580 790 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 CXCR5P32302 372 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 DSG1Q02413 1049 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 RASSF7Q02833 373 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 GALNT15Q8N3T1 639 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 FAM133AQ8N9E0 248 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 NDNQ99608 321 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 MRPL44Q9H9J2 332 aaKnown RBP5.57□□□□□ -1.52
SCN11A-202ENST00000444237 CABP5Q9NP86 173 aa5.57□□□□□ -1.52
SCN11A-202ENST00000444237 SAMSN1Q9NSI8 373 aaKnown RBP5.57□□□□□ -1.52
SCN11A-202ENST00000444237 INO80Q9ULG1 1556 aaPredicted RBP5.57□□□□□ -1.52
SCN11A-202ENST00000444237 GTPBP6O43824 516 aaPredicted RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 DAB1O75553 588 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 EPB41P11171 864 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 LONP1P36776 959 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 ASPHQ12797 758 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 C10orf76Q5T2E6 689 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TMCO4Q5TGY1 634 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 MIS18BP1Q6P0N0 1132 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 CNNM1Q9NRU3 951 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 IPO5O00410 1097 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 CBFA2T3O75081 653 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 OATP04181 439 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 CHN1P15882 459 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 PAX3P23760 479 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 RGS2P41220 211 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 PLCB3Q01970 1234 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 IKQ13123 557 aaPredicted RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 RCN1Q15293 331 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 GPR162Q16538 588 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TRIM16LQ309B1 348 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 WLSQ5T9L3 541 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 RBM43Q6ZSC3 357 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TMCO5AQ8N6Q1 288 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TRIM63Q969Q1 353 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TMEM87BQ96K49 555 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 FAM161BQ96MY7 647 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 LRRC1Q9BTT6 524 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 CCDC28BQ9BUN5 200 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 ZWILCHQ9H900 591 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 EURLQ9NYK6 297 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 SPDYE3A6NKU9 549 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 AP5Z1O43299 807 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 KRT14P02533 472 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TRPC1P48995 793 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 HDAC4P56524 1084 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TNIP1Q15025 636 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 PTPN21Q16825 1174 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 WASHC2DQ5SRD0 308 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 RARS2Q5T160 578 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 KIF2BQ8N4N8 673 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 AZI2Q9H6S1 392 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 QTRT2Q9H974 415 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 DDX28Q9NUL7 540 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TMOD3Q9NYL9 352 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 DBF4Q9UBU7 674 aaPredicted RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 RWDD2AQ9UIY3 292 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 USP21Q9UK80 565 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 SNX12Q9UMY4 172 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 MAPK8IP1Q9UQF2 711 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TRAF5O00463 557 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 GNA14O95837 355 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 CALM1P0DP23 149 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 CALM2P0DP24 149 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 CALM3P0DP25 149 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 RFC5P40937 340 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 SLCO1A2P46721 670 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 EIF2B2P49770 351 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 PTH1RQ03431 593 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 GRIN1Q05586 938 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 BLMHQ13867 455 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 CEP55Q53EZ4 464 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 KIF6Q6ZMV9 814 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 RGS9BPQ6ZS82 235 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 OGFOD1Q8N543 542 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 MPP4Q96JB8 637 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 NT5C3AQ9H0P0 336 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 MRPL46Q9H2W6 279 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 OLFML3Q9NRN5 406 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 TXNDC16Q9P2K2 825 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 DIS3Q9Y2L1 958 aaKnown RBP5.56□□□□□ -1.52
SCN11A-202ENST00000444237 EMILIN1Q9Y6C2 1016 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 ZFYVE9O95405 1425 aa5.56□□□□□ -1.52
SCN11A-202ENST00000444237 GOLGA8QA0A0J9YX86 632 aa5.55□□□□□ -1.52
SCN11A-202ENST00000444237 GOLGA8OA6NCC3 632 aa5.55□□□□□ -1.52
SCN11A-202ENST00000444237 GOLGA8NF8WBI6 632 aa5.55□□□□□ -1.52
SCN11A-202ENST00000444237 RNF113AO15541 343 aaKnown RBP5.55□□□□□ -1.52
SCN11A-202ENST00000444237 ATP9AO75110 1047 aa5.55□□□□□ -1.52
SCN11A-202ENST00000444237 TSPAN9O75954 239 aa5.55□□□□□ -1.52
SCN11A-202ENST00000444237 KRT38O76015 456 aa5.55□□□□□ -1.52
SCN11A-202ENST00000444237 LARGE1O95461 756 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms