RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 SPATA33Q96N06 139 aa16.32■□□□□ 0.2
LINC00642-202ENST00000442515 MAF1Q9H063 256 aa16.32■□□□□ 0.2
LINC00642-202ENST00000442515 RC3H2Q9HBD1 1191 aaKnown RBP16.32■□□□□ 0.2
LINC00642-202ENST00000442515 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
LINC00642-202ENST00000442515 TREHO43280 583 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 CAND2O75155 1236 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 SIGLEC14Q08ET2 396 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 ADAM15Q13444 863 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 CBX2Q14781 532 aaPredicted RBP16.31■□□□□ 0.2
LINC00642-202ENST00000442515 MYSM1Q5VVJ2 828 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 SMRP1Q8NCR6 262 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 CLP1Q92989 425 aaKnown RBP16.31■□□□□ 0.2
LINC00642-202ENST00000442515 C16orf70Q9BSU1 422 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 PXMP2Q9NR77 195 aa16.31■□□□□ 0.2
LINC00642-202ENST00000442515 NR3C2P08235 984 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 SMIM10L2AP0DMW4 78 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 SMIM10L2BP0DMW5 78 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 CAMK1Q14012 370 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 CELF3Q5SZQ8 465 aaKnown RBP16.3■□□□□ 0.2
LINC00642-202ENST00000442515 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
LINC00642-202ENST00000442515 MCF2L2Q86YR7 1114 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 ASIC4Q96FT7 647 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 IRF2BPLQ9H1B7 796 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 CLEC1BQ9P126 229 aa16.3■□□□□ 0.2
LINC00642-202ENST00000442515 RGS20O76081 388 aa16.29■□□□□ 0.2
LINC00642-202ENST00000442515 GGPS1O95749 300 aa16.29■□□□□ 0.2
LINC00642-202ENST00000442515 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
LINC00642-202ENST00000442515 ADGRD2Q7Z7M1 963 aa16.29■□□□□ 0.2
LINC00642-202ENST00000442515 PI4K2BQ8TCG2 481 aa16.29■□□□□ 0.2
LINC00642-202ENST00000442515 CHMP4BQ9H444 224 aaKnown RBP16.29■□□□□ 0.2
LINC00642-202ENST00000442515 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
LINC00642-202ENST00000442515 DNAH14Q0VDD8 3507 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 H3BRB1 525 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 UBA1P22314 1058 aaKnown RBP16.28■□□□□ 0.2
LINC00642-202ENST00000442515 AVPR2P30518 371 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 COASYQ13057 564 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 TTC14Q96N46 770 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 PLVAPQ9BX97 442 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 RNPEPQ9H4A4 650 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 TUT1Q9H6E5 874 aaKnown RBP16.28■□□□□ 0.2
LINC00642-202ENST00000442515 USP15Q9Y4E8 981 aaPredicted RBP16.28■□□□□ 0.2
LINC00642-202ENST00000442515 SPTBN4Q9H254 2564 aa16.28■□□□□ 0.2
LINC00642-202ENST00000442515 ATG2AQ2TAZ0 1938 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 RALGAPA2Q2PPJ7 1873 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 KMT2EQ8IZD2 1858 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 TTC41PQ6P2S7 1318 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 CCDC171Q6TFL3 1326 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 PROB1E7EW31 1015 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 H0Y858 1186 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 LGALS2P05162 132 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 HSPD1P10809 573 aaKnown RBP16.27■□□□□ 0.2
LINC00642-202ENST00000442515 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC00642-202ENST00000442515 SP2Q02086 613 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 BTG3Q14201 252 aaPredicted RBP16.27■□□□□ 0.2
LINC00642-202ENST00000442515 ASCL5Q7RTU5 278 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 EFHBQ8N7U6 833 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 TLR9Q9NR96 1032 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 BARX2Q9UMQ3 279 aaPredicted RBP16.27■□□□□ 0.2
LINC00642-202ENST00000442515 PLAGL2Q9UPG8 496 aa16.27■□□□□ 0.2
LINC00642-202ENST00000442515 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.2
LINC00642-202ENST00000442515 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.19
LINC00642-202ENST00000442515 GLP2RO95838 553 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
LINC00642-202ENST00000442515 DNAJB1P25685 340 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 ALX1Q15699 326 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 QRICH1Q2TAL8 776 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 FAM26DQ5JW98 314 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 KCNV1Q6PIU1 500 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 ADGRF4Q8IZF3 695 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 MIER1Q8N108 512 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 ZNF689Q96CS4 500 aaPredicted RBP16.26■□□□□ 0.19
LINC00642-202ENST00000442515 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
LINC00642-202ENST00000442515 PHF7Q9BWX1 381 aaPredicted RBP16.26■□□□□ 0.19
LINC00642-202ENST00000442515 CFBP00751 764 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 FGAP02671 866 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 ITGB1P05556 798 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 GHRP10912 638 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 ICAM3P32942 547 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 IL31RAQ8NI17 732 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 OTUD7AQ8TE49 926 aaPredicted RBP16.25■□□□□ 0.19
LINC00642-202ENST00000442515 GPKOWQ92917 476 aaPredicted RBP eCLIP16.25■□□□□ 0.19
LINC00642-202ENST00000442515 P2RX5Q93086 422 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 DCTPP1Q9H773 170 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 MLXIPQ9HAP2 919 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 SETD4Q9NVD3 440 aa16.25■□□□□ 0.19
LINC00642-202ENST00000442515 PRR23AA6NEV1 266 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 OPLAHO14841 1288 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 KDM4AO75164 1064 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 PDGFBP01127 241 aaPredicted RBP16.24■□□□□ 0.19
LINC00642-202ENST00000442515 CHRNA1P02708 482 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 GNAT1P11488 350 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 NRIP1P48552 1158 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 HSD17B4P51659 736 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 HAND2P61296 217 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 ERMP1Q7Z2K6 904 aa16.24■□□□□ 0.19
LINC00642-202ENST00000442515 MRPL42Q9Y6G3 142 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms