RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 H3BRB1 525 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 GRM6O15303 877 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 TBX10O75333 385 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 RGS20O76081 388 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 EYA4O95677 639 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 LINC00271P0C7V0 271 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 PCP11498 1178 aaKnown RBP11.67□□□□□ -0.54
SYN3-204ENST00000441821 ADAM15Q13444 863 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 SUGP1Q8IWZ8 645 aaKnown RBP11.67□□□□□ -0.54
SYN3-204ENST00000441821 CLP1Q92989 425 aaKnown RBP11.67□□□□□ -0.54
SYN3-204ENST00000441821 TUT1Q9H6E5 874 aaKnown RBP11.67□□□□□ -0.54
SYN3-204ENST00000441821 HELLSQ9NRZ9 838 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 TECTAO75443 2155 aa11.67□□□□□ -0.54
SYN3-204ENST00000441821 MYH7BA7E2Y1 1941 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 ATG2AQ2TAZ0 1938 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 TREHO43280 583 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 GGPS1O95749 300 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 CTSHP09668 335 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 SMIM10L2AP0DMW4 78 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 SMIM10L2BP0DMW5 78 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 TGFB3P10600 412 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 GTF2F1P35269 517 aaKnown RBP eCLIP11.66□□□□□ -0.54
SYN3-204ENST00000441821 HSD17B4P51659 736 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 ZXDAP98168 799 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 FOXK2Q01167 660 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 SP2Q02086 613 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 MFSD6Q6ZSS7 791 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 DGKHQ86XP1 1220 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 ADGRF4Q8IZF3 695 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 FBXL6Q8N531 539 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 MSLNLQ96KJ4 702 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 RNPEPQ9H4A4 650 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 IGFLR1Q9H665 355 aa11.66□□□□□ -0.54
SYN3-204ENST00000441821 RC3H2Q9HBD1 1191 aaKnown RBP11.66□□□□□ -0.54
SYN3-204ENST00000441821 ZMYM6O95789 1325 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 LOC730098B7Z3J9 87 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 LINC01565O15544 149 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 GFRA3O60609 400 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 CFBP00751 764 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 MMP1P03956 469 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 GNAT1P11488 350 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 GHRHRQ02643 423 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 QRICH1Q2TAL8 776 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 FAM26DQ5JW98 314 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 STOX1Q6ZVD7 989 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 VSIG10LQ86VR7 867 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 OTUD7AQ8TE49 926 aaPredicted RBP11.65□□□□□ -0.54
SYN3-204ENST00000441821 PDCD2LQ9BRP1 358 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 PLVAPQ9BX97 442 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 IRF2BPLQ9H1B7 796 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.54
SYN3-204ENST00000441821 ALG13Q9NP73 1137 aaKnown RBP11.65□□□□□ -0.54
SYN3-204ENST00000441821 MAP3K20Q9NYL2 800 aaKnown RBP11.65□□□□□ -0.54
SYN3-204ENST00000441821 DCHS1Q96JQ0 3298 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 ADGRA3Q8IWK6 1321 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 SORBS3O60504 671 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 LGALS2P05162 132 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 MYCLP12524 364 aaPredicted RBP11.64□□□□□ -0.55
SYN3-204ENST00000441821 MX1P20591 662 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 UBA1P22314 1058 aaKnown RBP11.64□□□□□ -0.55
SYN3-204ENST00000441821 NDUFV1P49821 464 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 NT5C2P49902 561 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 HAND2P61296 217 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 COASYQ13057 564 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 CAMK1Q14012 370 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 CBX2Q14781 532 aaPredicted RBP11.64□□□□□ -0.55
SYN3-204ENST00000441821 MCMDC2Q4G0Z9 681 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 ASPRV1Q53RT3 343 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 C20orf194Q5TEA3 1177 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 PNMA1Q8ND90 353 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 ESR2Q92731 530 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 P2RX5Q93086 422 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 PPP2R3CQ969Q6 453 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 ZNF689Q96CS4 500 aaPredicted RBP11.64□□□□□ -0.55
SYN3-204ENST00000441821 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
SYN3-204ENST00000441821 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 PLAGL2Q9UPG8 496 aa11.64□□□□□ -0.55
SYN3-204ENST00000441821 OPLAHO14841 1288 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 RRP1P56182 461 aaKnown RBP11.63□□□□□ -0.55
SYN3-204ENST00000441821 ADAM17P78536 824 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 SIGLEC14Q08ET2 396 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 BTG3Q14201 252 aaPredicted RBP11.63□□□□□ -0.55
SYN3-204ENST00000441821 PGM5Q15124 567 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 NAALADL2Q58DX5 795 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 CCDC178Q5BJE1 867 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 TICAM2Q86XR7 235 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 SAMD3Q8N6K7 520 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 EFHBQ8N7U6 833 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 SMRP1Q8NCR6 262 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 ZKSCAN3Q9BRR0 538 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 AMNQ9BXJ7 453 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 SETD4Q9NVD3 440 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 CLEC1BQ9P126 229 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 KMT2EQ8IZD2 1858 aa11.63□□□□□ -0.55
SYN3-204ENST00000441821 ZFHX2Q9C0A1 2572 aaPredicted RBP11.63□□□□□ -0.55
SYN3-204ENST00000441821 CCDC171Q6TFL3 1326 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 ENPP3O14638 875 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 DHX16O60231 1041 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms