RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 GRAPQ13588 217 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 ZNF174Q15697 407 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 MIS18BP1Q6P0N0 1132 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 GRAPLQ8TC17 118 aaPredicted RBP18.45■□□□□ 0.54
PMS1-213ENST00000441310 CNOT8Q9UFF9 292 aaKnown RBP18.45■□□□□ 0.54
PMS1-213ENST00000441310 SLC12A6Q9UHW9 1150 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 PCDHA13Q9Y5I0 950 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 TMTC2Q8N394 836 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 ZNF507Q8TCN5 953 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 ZNF526Q8TF50 670 aaPredicted RBP18.45■□□□□ 0.54
PMS1-213ENST00000441310 ZNF570Q96NI8 536 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 BRIP1Q9BX63 1249 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 A0A1W2PQC6 194 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 WNT7AO00755 349 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 UFL1O94874 794 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 SERPINB2P05120 415 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 LDHBP07195 334 aaKnown RBP18.45■□□□□ 0.54
PMS1-213ENST00000441310 EARS2Q5JPH6 523 aaKnown RBP18.45■□□□□ 0.54
PMS1-213ENST00000441310 CATIPQ7Z7H3 387 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 TRIM47Q96LD4 638 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 MAGEC2Q9UBF1 373 aaPredicted RBP18.45■□□□□ 0.54
PMS1-213ENST00000441310 SAP30BPQ9UHR5 308 aaKnown RBP18.45■□□□□ 0.54
PMS1-213ENST00000441310 CHD4Q14839 1912 aa18.45■□□□□ 0.54
PMS1-213ENST00000441310 SRRM3A6NNA2 597 aaPredicted RBP18.44■□□□□ 0.54
PMS1-213ENST00000441310 CAND2O75155 1236 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 GYS1P13807 737 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 GPSM2P81274 684 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 FAM167BQ9BTA0 163 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 ECM29Q5VYK3 1845 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 TSPY2A6NKD2 308 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 H7C1D1 291 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 KIF4AO95239 1232 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 MYBL1P10243 752 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 PRLRP16471 622 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 CFAP221Q4G0U5 840 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 ARMC3Q5W041 872 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 SLC44A5Q8NCS7 719 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 SH3RF3Q8TEJ3 882 aaPredicted RBP18.44■□□□□ 0.54
PMS1-213ENST00000441310 AGAP11Q8TF27 550 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 SHISA4Q96DD7 197 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 MTRQ99707 1265 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 TRPC5Q9UL62 973 aaPredicted RBP18.44■□□□□ 0.54
PMS1-213ENST00000441310 NOVA2Q9UNW9 492 aaKnown RBP18.44■□□□□ 0.54
PMS1-213ENST00000441310 CACNA1SQ13698 1873 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 SMNDC1O75940 238 aaKnown RBP eCLIP18.44■□□□□ 0.54
PMS1-213ENST00000441310 VEGFAP15692 232 aaPredicted RBP18.44■□□□□ 0.54
PMS1-213ENST00000441310 MREGQ8N565 214 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 ANAPC4Q9UJX5 808 aa18.44■□□□□ 0.54
PMS1-213ENST00000441310 STK36Q9NRP7 1315 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 RASSF10A6NK89 507 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 PPIP5K2O43314 1243 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 DEXIO95424 95 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 ZBED6P86452 979 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 ZNF658Q5TYW1 1059 aaPredicted RBP18.43■□□□□ 0.54
PMS1-213ENST00000441310 TLR10Q9BXR5 811 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 PANK4Q9NVE7 773 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.43■□□□□ 0.54
PMS1-213ENST00000441310 SALL4Q9UJQ4 1053 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 PECAM1P16284 738 aaPredicted RBP18.43■□□□□ 0.54
PMS1-213ENST00000441310 FAM133BQ5BKY9 247 aaKnown RBP18.43■□□□□ 0.54
PMS1-213ENST00000441310 KLHL7Q8IXQ5 586 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 KDM4CQ9H3R0 1056 aa18.43■□□□□ 0.54
PMS1-213ENST00000441310 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
PMS1-213ENST00000441310 PDS5AQ29RF7 1337 aaKnown RBP18.42■□□□□ 0.54
PMS1-213ENST00000441310 DCDC2CA8MYV0 355 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 RPN1P04843 607 aaKnown RBP18.42■□□□□ 0.54
PMS1-213ENST00000441310 CTNNA1P35221 906 aaKnown RBP18.42■□□□□ 0.54
PMS1-213ENST00000441310 HSD17B3P37058 310 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 DNM2P50570 870 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 C2CD5Q86YS7 1000 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 MAPKAPK5Q8IW41 473 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 TAF1DQ9H5J8 278 aaPredicted RBP18.42■□□□□ 0.54
PMS1-213ENST00000441310 EXOC1Q9NV70 894 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 AKR1B10O60218 316 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 PPP2R2AP63151 447 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 WHAMMQ8TF30 809 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 LAMB2P55268 1798 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 CCT8L1PA6NM43 557 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 C6orf229H3BNL8 230 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
PMS1-213ENST00000441310 C3orf20Q8ND61 904 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 MDM1Q8TC05 714 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 TTYH3Q9C0H2 523 aa18.42■□□□□ 0.54
PMS1-213ENST00000441310 NOP53Q9NZM5 478 aaKnown RBP18.42■□□□□ 0.54
PMS1-213ENST00000441310 C5orf60A6NFR6 353 aa18.41■□□□□ 0.54
PMS1-213ENST00000441310 RIMBP2O15034 1052 aa18.41■□□□□ 0.54
PMS1-213ENST00000441310 TROAPQ12815 778 aa18.41■□□□□ 0.54
PMS1-213ENST00000441310 TUBGCP2Q9BSJ2 902 aa18.41■□□□□ 0.54
PMS1-213ENST00000441310 GTPBP6O43824 516 aaPredicted RBP18.41■□□□□ 0.54
PMS1-213ENST00000441310 SRGNP10124 158 aa18.41■□□□□ 0.54
PMS1-213ENST00000441310 GHRP10912 638 aa18.41■□□□□ 0.54
PMS1-213ENST00000441310 RPS6KA3P51812 740 aa18.41■□□□□ 0.54
PMS1-213ENST00000441310 KIF11P52732 1056 aa18.41■□□□□ 0.54
PMS1-213ENST00000441310 F8W031 263 aaPredicted RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 DRD4P21917 467 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 EIF4A3P38919 411 aaKnown RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 RAB27AP51159 221 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 MAGOHP61326 146 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms