RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 DSEQ9UL01 958 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 SCG2P13521 617 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 RWDD2BP57060 319 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 CACNA2D3Q8IZS8 1091 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 AFAP1L2Q8N4X5 818 aa12.56□□□□□ -0.4
CCBE1-202ENST00000439986 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 DDX28Q9NUL7 540 aaKnown RBP12.56□□□□□ -0.4
CCBE1-202ENST00000439986 FLOT1O75955 427 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 IGKV5-2P06315 115 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 IFNAR1P17181 557 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 SCNN1DP51172 638 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 IL1RL1Q01638 556 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 E4F1Q66K89 784 aaPredicted RBP12.55□□□□□ -0.4
CCBE1-202ENST00000439986 RSAD2Q8WXG1 361 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 PCCAP05165 728 aaPredicted RBP12.55□□□□□ -0.4
CCBE1-202ENST00000439986 FOSL2P15408 326 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 EGFL6Q8IUX8 553 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 ALDH8A1Q9H2A2 487 aaPredicted RBP12.55□□□□□ -0.4
CCBE1-202ENST00000439986 CACYBPQ9HB71 228 aaKnown RBP12.55□□□□□ -0.4
CCBE1-202ENST00000439986 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 MFAP3LO75121 409 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 OATP04181 439 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 HNRNPCP07910 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCBE1-202ENST00000439986 CASP2P42575 452 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 SLC12A2P55011 1212 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 PARP10Q53GL7 1025 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 STK32CQ86UX6 486 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 ZBTB38Q8NAP3 1195 aaPredicted RBP12.55□□□□□ -0.4
CCBE1-202ENST00000439986 BEGAINQ9BUH8 593 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 RNF26Q9BY78 433 aaPredicted RBP12.55□□□□□ -0.4
CCBE1-202ENST00000439986 GIMAP4Q9NUV9 329 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 ANKFY1Q9P2R3 1169 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 BAIAP2L1Q9UHR4 511 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 KCNK3O14649 394 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 SLC4A1P02730 911 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 TECP42680 631 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 GUCY2DQ02846 1103 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 GRAMD4Q6IC98 578 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 THRAP3Q9Y2W1 955 aaKnown RBP12.55□□□□□ -0.4
CCBE1-202ENST00000439986 LRRD1A4D1F6 860 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 ANKRD65E5RJM6 399 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 CD53P19397 219 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 SCP2P22307 547 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 KDM4CQ9H3R0 1056 aa12.55□□□□□ -0.4
CCBE1-202ENST00000439986 GOLGA8HP0CJ92 632 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
CCBE1-202ENST00000439986 GREM2Q9H772 168 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
CCBE1-202ENST00000439986 CAPN9O14815 690 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 PDE8BO95263 885 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 NDUFA10O95299 355 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 EEF1GP26641 437 aaKnown RBP12.54□□□□□ -0.4
CCBE1-202ENST00000439986 ADD2P35612 726 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 GPKOWQ92917 476 aaPredicted RBP eCLIP12.54□□□□□ -0.4
CCBE1-202ENST00000439986 ABCF3Q9NUQ8 709 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 A0A087WUV0 522 aaPredicted RBP12.54□□□□□ -0.4
CCBE1-202ENST00000439986 RGL2O15211 777 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 LUC7L3O95232 432 aaKnown RBP12.54□□□□□ -0.4
CCBE1-202ENST00000439986 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 BCAMP50895 628 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 NAALADL2Q58DX5 795 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 REXO1Q8N1G1 1221 aaKnown RBP12.54□□□□□ -0.4
CCBE1-202ENST00000439986 POMGNT1Q8WZA1 660 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 CNOT6LQ96LI5 555 aaKnown RBP12.54□□□□□ -0.4
CCBE1-202ENST00000439986 KRT12Q99456 494 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 PLCB1Q9NQ66 1216 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 ANLNQ9NQW6 1124 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 USP40Q9NVE5 1235 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 JRKLQ9Y4A0 524 aa12.54□□□□□ -0.4
CCBE1-202ENST00000439986 E9PCH4 1651 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 CHMP6Q96FZ7 201 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 SLC39A2Q9NP94 309 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 SMIM24O75264 130 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 MUM1Q2TAK8 710 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 TSGA10IPQ3SY00 556 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
CCBE1-202ENST00000439986 GTF2IP78347 998 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 C2orf54Q08AI8 447 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 ZSWIM5Q9P217 1185 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 STAM2O75886 525 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 IFNB1P01574 187 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 DENND2CQ68D51 928 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 DEPTORQ8TB45 409 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 AP1M1Q9BXS5 423 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 FAM129AQ9BZQ8 928 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 WDR46O15213 610 aaKnown RBP12.53□□□□□ -0.4
CCBE1-202ENST00000439986 BCRP11274 1271 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 KRT4P19013 534 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 EPHB4P54760 987 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 Q3C1V9 767 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 PRR16Q569H4 304 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 GPBP1Q86WP2 473 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 ABTB1Q969K4 478 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms