RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DNTTIP2Q5QJE6 756 aaKnown RBP5.36□□□□□ -1.55
EDEM3-203ENST00000439962 GPATCH4Q5T3I0 446 aaKnown RBP5.36□□□□□ -1.55
EDEM3-203ENST00000439962 NOSTRINQ8IVI9 506 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 CKAP2LQ8IYA6 745 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 FANCBQ8NB91 859 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 UBE2Q2Q8WVN8 375 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 SDF4Q9BRK5 362 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 SLC26A6Q9BXS9 759 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 PPP1R12CQ9BZL4 782 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 TTC12Q9H892 705 aaPredicted RBP5.36□□□□□ -1.55
EDEM3-203ENST00000439962 GNRH1P01148 92 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 SYKP43405 635 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 GUCY1B3Q02153 619 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 RTN1Q16799 776 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 JAKMIP3Q5VZ66 844 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 CCDC186Q7Z3E2 898 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 NECAB2Q7Z6G3 386 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 DRC7Q8IY82 874 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 KRI1Q8N9T8 703 aaKnown RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 MLKLQ8NB16 471 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 IL31RAQ8NI17 732 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 PXYLP1Q8TE99 480 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ANKRD7Q92527 254 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 GJA10Q969M2 543 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 DDX20Q9UHI6 824 aaKnown RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ZNFX1Q9P2E3 1918 aaKnown RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ABCB11O95342 1321 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 KBTBD13C9JR72 458 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ZBTB5O15062 677 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ADAMTS3O15072 1205 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 PRPF3O43395 683 aaKnown RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 MYL3P08590 195 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 PFKFB1P16118 471 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ERCC5P28715 1186 aaPredicted RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 NDUFA8P51970 172 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 NAPAP54920 295 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 MYL5Q02045 173 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 TNFAIP2Q03169 654 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ORC2Q13416 577 aaPredicted RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 KCNA10Q16322 511 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 LRRC26Q2I0M4 334 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ASPRV1Q53RT3 343 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 LHX8Q68G74 356 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 C11orf57Q6ZUT1 292 aaPredicted RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 NYAP1Q6ZVC0 841 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 ANKS1AQ92625 1134 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 RRP36Q96EU6 259 aaKnown RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 AMNQ9BXJ7 453 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 WDR11Q9BZH6 1224 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 RANBP17Q9H2T7 1088 aaKnown RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 SH3GLB2Q9NR46 395 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 FAM217BQ9NTX9 383 aaPredicted RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 TMEM260Q9NX78 707 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 VPS54Q9P1Q0 977 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 TELO2Q9Y4R8 837 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 SRPRBQ9Y5M8 271 aaKnown RBP5.35□□□□□ -1.55
EDEM3-203ENST00000439962 CLIC4Q9Y696 253 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 WDR87Q6ZQQ6 2873 aa5.35□□□□□ -1.55
EDEM3-203ENST00000439962 TXNP10599 105 aaKnown RBP5.34□□□□□ -1.55
EDEM3-203ENST00000439962 TUBB4BP68371 445 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 AKAP17AQ02040 695 aaKnown RBP5.34□□□□□ -1.55
EDEM3-203ENST00000439962 IRF5Q13568 498 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 ZNF792Q3KQV3 632 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 GALNT17Q6IS24 598 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 KRBA2Q6ZNG9 492 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 SPATA20Q8TB22 786 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 GTF3C2Q8WUA4 911 aaPredicted RBP5.34□□□□□ -1.55
EDEM3-203ENST00000439962 CLEC4DQ8WXI8 215 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 USP6NLQ92738 828 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 BRMS1Q9HCU9 246 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 PAK6Q9NQU5 681 aaPredicted RBP5.34□□□□□ -1.55
EDEM3-203ENST00000439962 TCP11L1Q9NUJ3 509 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 ADAMTS5Q9UNA0 930 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 PFASO15067 1338 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 TTC28Q96AY4 2481 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 MGAMO43451 1857 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 SEPT4O43236 478 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 ARIH2O95376 493 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 MYL1P05976 194 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 ASGR1P07306 291 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 ZNF286BP0CG31 522 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 XRCC5P13010 732 aaKnown RBP5.34□□□□□ -1.55
EDEM3-203ENST00000439962 CYBAP13498 195 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 SMPD1P17405 629 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 MARK3P27448 753 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 KIF5BP33176 963 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 ALDH5A1P51649 535 aaPredicted RBP5.34□□□□□ -1.55
EDEM3-203ENST00000439962 PRMT2P55345 433 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 GNL2Q13823 731 aaKnown RBP5.34□□□□□ -1.55
EDEM3-203ENST00000439962 LRRC41Q15345 812 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 TRIM60Q495X7 471 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 TYW1BQ6NUM6 668 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 SH3RF1Q7Z6J0 888 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 TLK2Q86UE8 772 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 CHST13Q8NET6 341 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 CYP2W1Q8TAV3 490 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 ZBTB10Q96DT7 871 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 FGD4Q96M96 766 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 PPP1R16BQ96T49 567 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 SRRTQ9BXP5 876 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms