RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 CNTNAP5Q8WYK1 1306 aa17.27■□□□□ 0.36
DHFR-201ENST00000439211 ATXN2Q99700 1313 aaKnown RBP17.27■□□□□ 0.36
DHFR-201ENST00000439211 SMIM23A6NLE4 172 aa17.27■□□□□ 0.36
DHFR-201ENST00000439211 PFDN1O60925 122 aa17.27■□□□□ 0.36
DHFR-201ENST00000439211 PPFIA2O75334 1257 aa17.27■□□□□ 0.36
DHFR-201ENST00000439211 PLCG1P19174 1290 aa17.27■□□□□ 0.36
DHFR-201ENST00000439211 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.36
DHFR-201ENST00000439211 IFIH1Q9BYX4 1025 aaKnown RBP17.27■□□□□ 0.36
DHFR-201ENST00000439211 VCXQ9H320 206 aa17.27■□□□□ 0.36
DHFR-201ENST00000439211 F8W031 263 aaPredicted RBP17.27■□□□□ 0.35
DHFR-201ENST00000439211 RNF225M0QZC1 329 aaPredicted RBP17.27■□□□□ 0.35
DHFR-201ENST00000439211 LGR5O75473 907 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 RTN3O95197 1032 aaPredicted RBP17.27■□□□□ 0.35
DHFR-201ENST00000439211 ELF3P78545 371 aaPredicted RBP17.27■□□□□ 0.35
DHFR-201ENST00000439211 PICALMQ13492 652 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 CCDC38Q502W7 563 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 RRAGAQ7L523 313 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 SPATA21Q7Z572 469 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 NUP58Q9BVL2 599 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 NLRC4Q9NPP4 1024 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 CTNNA1P35221 906 aaKnown RBP17.27■□□□□ 0.35
DHFR-201ENST00000439211 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.35
DHFR-201ENST00000439211 TPTE2Q6XPS3 522 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 RUFY4Q6ZNE9 571 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 ARMCX6Q7L4S7 300 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 DRAXINQ8NBI3 349 aaPredicted RBP17.27■□□□□ 0.35
DHFR-201ENST00000439211 KLHL29Q96CT2 875 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 TMEM60Q9H2L4 133 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 TBC1D7Q9P0N9 293 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 SWAP70Q9UH65 585 aa17.27■□□□□ 0.35
DHFR-201ENST00000439211 STXBP3O00186 592 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 CAMTA2O94983 1202 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 GNA11P29992 359 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 ABCD1P33897 745 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 KRT71Q3SY84 523 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 SEPT14Q6ZU15 432 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 SV2BQ7L1I2 683 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 HEXIM1O94992 359 aaKnown RBP17.26■□□□□ 0.35
DHFR-201ENST00000439211 ROR2Q01974 943 aaKnown RBP17.26■□□□□ 0.35
DHFR-201ENST00000439211 MIPOL1Q8TD10 442 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 NSUN4Q96CB9 384 aaKnown RBP17.26■□□□□ 0.35
DHFR-201ENST00000439211 TSG101Q99816 390 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 NHEJ1Q9H9Q4 299 aaPredicted RBP17.26■□□□□ 0.35
DHFR-201ENST00000439211 KCNQ2O43526 872 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 EEF1GP26641 437 aaKnown RBP17.26■□□□□ 0.35
DHFR-201ENST00000439211 KLK7P49862 253 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 IKQ13123 557 aaPredicted RBP17.26■□□□□ 0.35
DHFR-201ENST00000439211 KRT26Q7Z3Y9 468 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
DHFR-201ENST00000439211 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 LRWD1Q9UFC0 647 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 PLAAQ9Y263 795 aa17.26■□□□□ 0.35
DHFR-201ENST00000439211 CTNND1O60716 968 aaKnown RBP17.25■□□□□ 0.35
DHFR-201ENST00000439211 NTSR2O95665 410 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 OR52Z1P0C646 297 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 PCP11498 1178 aaKnown RBP17.25■□□□□ 0.35
DHFR-201ENST00000439211 ARL6IP4Q66PJ3 421 aaKnown RBP17.25■□□□□ 0.35
DHFR-201ENST00000439211 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 OSBPL7Q9BZF2 842 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 RMI1Q9H9A7 625 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 CORO1CQ9ULV4 474 aaPredicted RBP17.25■□□□□ 0.35
DHFR-201ENST00000439211 DCCP43146 1447 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 ANKRD33BA6NCL7 494 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 GNPATO15228 680 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 LDHCP07864 332 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 C8orf37Q96NL8 207 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 ANKRD2Q9GZV1 360 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 SMARCAL1Q9NZC9 954 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 ANAPC4Q9UJX5 808 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 ITPK1Q13572 414 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 CCDC6Q16204 474 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 INTS5Q6P9B9 1019 aaKnown RBP17.25■□□□□ 0.35
DHFR-201ENST00000439211 C3orf67Q6ZVT6 689 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 FAM228AQ86W67 206 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 MAGEC3Q8TD91 643 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 P2RX5Q93086 422 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 NOVA2Q9UNW9 492 aaKnown RBP17.25■□□□□ 0.35
DHFR-201ENST00000439211 RPS6KL1Q9Y6S9 549 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 LAMA4Q16363 1823 aa17.25■□□□□ 0.35
DHFR-201ENST00000439211 MAGEA1P43355 309 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 PMS1P54277 932 aaKnown RBP17.24■□□□□ 0.35
DHFR-201ENST00000439211 ACBD5Q5T8D3 534 aaPredicted RBP17.24■□□□□ 0.35
DHFR-201ENST00000439211 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 CWF19L1Q69YN2 538 aaKnown RBP17.24■□□□□ 0.35
DHFR-201ENST00000439211 CNNM4Q6P4Q7 775 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 RNF168Q8IYW5 571 aaPredicted RBP17.24■□□□□ 0.35
DHFR-201ENST00000439211 FAM81AQ8TBF8 368 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 SMCR8Q8TEV9 937 aaPredicted RBP17.24■□□□□ 0.35
DHFR-201ENST00000439211 IFT74Q96LB3 600 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 SRP68Q9UHB9 627 aaKnown RBP17.24■□□□□ 0.35
DHFR-201ENST00000439211 KIF1AQ12756 1690 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 TRAF5O00463 557 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 TRIM37O94972 964 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 FGFR1OPO95684 399 aaKnown RBP17.24■□□□□ 0.35
DHFR-201ENST00000439211 FCER1AP12319 257 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 SPATA20Q8TB22 786 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms