RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ARHGAP44Q17R89 818 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 MAATS1Q7Z4T9 603 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 LDHDQ86WU2 507 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 RMDN3Q96TC7 470 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 SELENOOQ9BVL4 669 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 METTL14Q9HCE5 456 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 TUBE1Q9UJT0 475 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 PRR12Q9ULL5 1215 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 SLIT2O94813 1529 aa12.72□□□□□ -0.37
TRAPPC9-202ENST00000438773 AFDNP55196 1824 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 OAS2P29728 719 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 STAT3P40763 770 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 HNRNPH2P55795 449 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 PSMD2Q13200 908 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 TCP11X2Q5H9J9 407 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 SAMD7Q7Z3H4 446 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 RGS22Q8NE09 1264 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 ATRIPQ8WXE1 791 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 NUCKS1Q9H1E3 243 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 CLIC2O15247 247 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 FOXP2O15409 715 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 MAN2A1Q16706 1144 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 SECISBP2LQ93073 1101 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 HSD3B7Q9H2F3 369 aa12.71□□□□□ -0.37
TRAPPC9-202ENST00000438773 POTEFA5A3E0 1075 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 SFI1A8K8P3 1242 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 POTEIP0CG38 1075 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 KRT5P13647 590 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 GMPSP49915 693 aaPredicted RBP12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 WDR44Q5JSH3 913 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 POTEGQ6S5H5 508 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 POTEEQ6S8J3 1075 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 RASGRP2Q7LDG7 609 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 TMEM110-MUSTN1A8MSY1 372 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 IREB2P48200 963 aaKnown RBP12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 RHBDL3P58872 404 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 ARMC9Q7Z3E5 817 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 AGBL3Q8NEM8 1001 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 DEPTORQ8TB45 409 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 ATP6V0A1Q93050 837 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 THAP9Q9H5L6 903 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 VCPKMTQ9H867 229 aa12.71□□□□□ -0.38
TRAPPC9-202ENST00000438773 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 GAP43P17677 238 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 KCTD2Q14681 263 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 APOBEC3HQ6NTF7 200 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 TRIM65Q6PJ69 517 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 EEPD1Q7L9B9 569 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 GOLGA5Q8TBA6 731 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 RAD54LQ92698 747 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 CCDC127Q96BQ5 260 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 PARVGQ9HBI0 331 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 PHRF1Q9P1Y6 1649 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 DACT2Q5SW24 774 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 SEPT14Q6ZU15 432 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 SUGCTQ9HAC7 445 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 RNF146Q9NTX7 359 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 PVALEFA0A1B0GWK0 134 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 ESYT2A0FGR8 921 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 SASH3O75995 380 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 CXCL9Q07325 125 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 CERS5Q8N5B7 392 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 TRIM9Q9C026 710 aa12.7□□□□□ -0.38
TRAPPC9-202ENST00000438773 ABCB11O95342 1321 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 ACTN4O43707 911 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 PRPF6O94906 941 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 NEFHP12036 1026 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 LRRC63Q05C16 580 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 EXOC3L4Q17RC7 722 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 CEP170P1Q96L14 293 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 NOX5Q96PH1 765 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 WDR24Q96S15 920 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 SYNCQ9H7C4 482 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 ALS2Q96Q42 1657 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 CYP2C19P33261 490 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 STAT1P42224 750 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 FMR1Q06787 632 aaKnown RBP eCLIP12.69□□□□□ -0.383e-6■■■■□ 21.3
TRAPPC9-202ENST00000438773 DMP1Q13316 513 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 PDIA5Q14554 519 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 EARS2Q5JPH6 523 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 AMIGO3Q86WK7 504 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 CDHR1Q96JP9 859 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 PLVAPQ9BX97 442 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 DEFB129Q9H1M3 183 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 BCRP11274 1271 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 SHMT1P34896 483 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 POLGP54098 1239 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 HMGCS2P54868 508 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms