RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 VSIG10LQ86VR7 867 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 LRCH3Q96II8 777 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 TOX2Q96NM4 488 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 UBE2OQ9C0C9 1292 aaKnown RBP9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 MAP3K20Q9NYL2 800 aaKnown RBP9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 DDX41Q9UJV9 622 aaKnown RBP9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 PTPRSQ13332 1948 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 NID2Q14112 1375 aa9.85□□□□□ -0.83
HERPUD2-206ENST00000438224 UMODL1Q5DID0 1318 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 A0A1W2PPC1 479 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 PIK3CDO00329 1044 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 NKRFO15226 690 aaKnown RBP eCLIP9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 SORBS3O60504 671 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 B4GALT4O60513 344 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 EIF3JO75822 258 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 MMP3P08254 477 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 MYL3P08590 195 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 HMGB1P09429 215 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 ADD1P35611 737 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 ITGA7Q13683 1181 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 TDHQ8IZJ6 230 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 FBXL16Q8N461 479 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 SAMD3Q8N6K7 520 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 AFG1LQ8WV93 481 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 KAT2BQ92831 832 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 VTI1AQ96AJ9 217 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 MPHOSPH6Q99547 160 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 UPF3BQ9BZI7 483 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 TRPV6Q9H1D0 765 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 SEC63Q9UGP8 760 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 TELO2Q9Y4R8 837 aa9.84□□□□□ -0.83
HERPUD2-206ENST00000438224 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 DCDC2CA8MYV0 355 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 B4DLN1 442 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 EPB41L2O43491 1005 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 PPFIA3O75145 1194 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 CABYRO75952 493 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 GH1P01241 217 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 UBA1P22314 1058 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 CCND2P30279 289 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 MRPL12P52815 198 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 RCAN1P53805 252 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 EVCP57679 992 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 TRAF1Q13077 416 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 NTRK3Q16288 839 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 SYNE3Q6ZMZ3 975 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 HEATR3Q7Z4Q2 680 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 VWCEQ96DN2 955 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 INPP4AQ96PE3 977 aaPredicted RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 CTAGE1Q96RT6 745 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 NCOA5Q9HCD5 579 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 TMEM39AQ9NV64 488 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 RBM28Q9NW13 759 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 PRKAG2Q9UGJ0 569 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 NAP1L2Q9ULW6 460 aaPredicted RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 MRVI1Q9Y6F6 885 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 SIP14410 1827 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 LOXHD1Q8IVV2 1947 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 CHD9Q3L8U1 2897 aa9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 MYH9P35579 1960 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-206ENST00000438224 STXBP3O00186 592 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 SPTLC1O15269 473 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 SEC24BO95487 1268 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 HOXD8P13378 290 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 RFX1P22670 979 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 CYP2C18P33260 490 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 CPT1AP50416 773 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 METAP2P50579 478 aaKnown RBP eCLIP9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 SHHQ15465 462 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 PKN1Q16512 942 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 NBPF20Q3BBV1 942 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 RUFY3Q7L099 469 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 C16orf59Q7L2K0 433 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 SMARCC2Q8TAQ2 1214 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 EMID1Q96A84 441 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 PGBD1Q96JS3 809 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 LBHD1Q9BQE6 289 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 MTG1Q9BT17 334 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 NOC4LQ9BVI4 516 aaKnown RBP9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 WNT8AQ9H1J5 351 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 ALDH8A1Q9H2A2 487 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 PSTPIP2Q9H939 334 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 TRMT13Q9NUP7 481 aaKnown RBP9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 RTEL1Q9NZ71 1219 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 PCDHGA10Q9Y5H3 936 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 MROH7Q68CQ1 1323 aa9.82□□□□□ -0.84
HERPUD2-206ENST00000438224 ZEB2O60315 1214 aa9.81□□□□□ -0.84
HERPUD2-206ENST00000438224 DTNBO60941 627 aa9.81□□□□□ -0.84
HERPUD2-206ENST00000438224 GGPS1O95749 300 aa9.81□□□□□ -0.84
HERPUD2-206ENST00000438224 TIMP1P01033 207 aa9.81□□□□□ -0.84
HERPUD2-206ENST00000438224 ZNF286BP0CG31 522 aa9.81□□□□□ -0.84
HERPUD2-206ENST00000438224 CYP2C9P11712 490 aa9.81□□□□□ -0.84
HERPUD2-206ENST00000438224 RAG1P15918 1043 aa9.81□□□□□ -0.84
HERPUD2-206ENST00000438224 PSMA5P28066 241 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms