RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ARMCX2Q7L311 632 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 GPIHBP1Q8IV16 184 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 STAG1Q8WVM7 1258 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 SLC10A4Q96EP9 437 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 KIF9Q9HAQ2 790 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 INHBAP08476 426 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 TRIM42Q8IWZ5 723 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 DESI2Q9BSY9 194 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 ZNF341Q9BYN7 854 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 VCX3AQ9NNX9 186 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 SRPRBQ9Y5M8 271 aaKnown RBP17.2■□□□□ 0.34
PTPN13-204ENST00000436978 NFKBIAP25963 317 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 KPNA2P52292 529 aaKnown RBP17.2■□□□□ 0.34
PTPN13-204ENST00000436978 CYP21A2P08686 494 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 IFNAR1P17181 557 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 EP400NLQ6ZTU2 488 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 CEP120Q8N960 986 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 ZNF653Q96CK0 615 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 FAM167AQ96KS9 214 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 SPATA31A3Q5VYP0 1347 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 TFAMQ00059 246 aaKnown RBP17.19■□□□□ 0.34
PTPN13-204ENST00000436978 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 USP17L8P0C7I0 530 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 PSMD6Q15008 389 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 SYNJ2BP-COX16A0A087WUM0 186 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 ARL13BQ3SXY8 428 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 C4orf50Q6ZRC1 276 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 COX16Q9P0S2 106 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 WDR46O15213 610 aaKnown RBP17.19■□□□□ 0.34
PTPN13-204ENST00000436978 ANKRD42Q8N9B4 389 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 KCTD6Q8NC69 237 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 MAD1L1Q9Y6D9 718 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 ARL4AP40617 200 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 ORC2Q13416 577 aaPredicted RBP17.19■□□□□ 0.34
PTPN13-204ENST00000436978 PBKQ96KB5 322 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 WDR19Q8NEZ3 1342 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 LDHAP00338 332 aaKnown RBP17.19■□□□□ 0.34
PTPN13-204ENST00000436978 SLC16A2P36021 539 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 CCDC170Q8IYT3 715 aa17.19■□□□□ 0.34
PTPN13-204ENST00000436978 PLA2G4BP0C869 781 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 PDXDC2PQ6P474 469 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 RNF207Q6ZRF8 634 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 NAA25Q14CX7 972 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 ZBTB9Q96C00 473 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
PTPN13-204ENST00000436978 HSPA6P17066 643 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 FBXO40Q9UH90 709 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 SERPING1P05155 500 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 RAPH1Q70E73 1250 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 KIF3CO14782 793 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 CPP00450 1065 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 SLFN14P0C7P3 912 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 MESDQ14696 234 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 SIX6OS1Q8N1H7 587 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 Q9H521 79 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 UBXN2AP68543 259 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 BZW1Q7L1Q6 419 aaKnown RBP17.18■□□□□ 0.34
PTPN13-204ENST00000436978 LRRC4Q9HBW1 653 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 PTPN22Q9Y2R2 807 aa17.18■□□□□ 0.34
PTPN13-204ENST00000436978 ADCK5Q3MIX3 580 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 C2orf69Q8N8R5 385 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 SDCCAG3Q96C92 435 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 HOXC10Q9NYD6 342 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 RPS6KA4O75676 772 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 GPT2Q8TD30 523 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 ZNF853P0CG23 659 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 MAN1B1Q9UKM7 699 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 MED14O60244 1454 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 RNF14Q9UBS8 474 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 STK36Q9NRP7 1315 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 TNFAIP2Q03169 654 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 SMAP1Q8IYB5 467 aaPredicted RBP17.17■□□□□ 0.34
PTPN13-204ENST00000436978 CRB1P82279 1406 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 PLCG1P19174 1290 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 LRRC8CQ8TDW0 803 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 BAG5Q9UL15 447 aa17.17■□□□□ 0.34
PTPN13-204ENST00000436978 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
PTPN13-204ENST00000436978 EFCC1Q9HA90 598 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 ZSWIM5Q9P217 1185 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 WDR64B1ANS9 1081 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 MIPOL1Q8TD10 442 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 MMP10P09238 476 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 FAM71BQ8TC56 605 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 HSPA8P11142 646 aaKnown RBP17.16■□□□□ 0.34
PTPN13-204ENST00000436978 CASP14P31944 242 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 COPB2P35606 906 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 YWHAGP61981 247 aaKnown RBP eCLIP17.16■□□□□ 0.34
PTPN13-204ENST00000436978 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
PTPN13-204ENST00000436978 EHHADHQ08426 723 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 RBBP5Q15291 538 aaKnown RBP17.16■□□□□ 0.34
PTPN13-204ENST00000436978 NARFQ9UHQ1 456 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 ARHGEF18Q6ZSZ5 1173 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 HDAC11Q96DB2 347 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 IL9RQ01113 521 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms