RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 TBC1D5Q92609 795 aa19.24■□□□□ 0.67
HMGN1P19-201ENST00000436976 RPGRIP1Q96KN7 1286 aa19.24■□□□□ 0.67
HMGN1P19-201ENST00000436976 TAAR1Q96RJ0 339 aa19.24■□□□□ 0.67
HMGN1P19-201ENST00000436976 PHF7Q9BWX1 381 aaPredicted RBP19.24■□□□□ 0.67
HMGN1P19-201ENST00000436976 ADGRA3Q8IWK6 1321 aa19.24■□□□□ 0.67
HMGN1P19-201ENST00000436976 B4DLN1 442 aa19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 CTSHP09668 335 aa19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 ICAM3P32942 547 aa19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 MRPL12P52815 198 aaKnown RBP19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 NUBP1P53384 320 aa19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 EFHBQ8N7U6 833 aa19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 BARX2Q9UMQ3 279 aaPredicted RBP19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 RWDD3Q9Y3V2 267 aa19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 WDR19Q8NEZ3 1342 aa19.23■□□□□ 0.67
HMGN1P19-201ENST00000436976 MED19A0JLT2 244 aaPredicted RBP19.22■□□□□ 0.67
HMGN1P19-201ENST00000436976 HOXC8P31273 242 aa19.22■□□□□ 0.67
HMGN1P19-201ENST00000436976 PTPN21Q16825 1174 aa19.22■□□□□ 0.67
HMGN1P19-201ENST00000436976 RIPOR3Q96MK2 946 aa19.22■□□□□ 0.67
HMGN1P19-201ENST00000436976 SEC62Q99442 399 aaKnown RBP19.22■□□□□ 0.67
HMGN1P19-201ENST00000436976 PLAGL2Q9UPG8 496 aa19.22■□□□□ 0.67
HMGN1P19-201ENST00000436976 CACNA1GO43497 2377 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 CEP250Q9BV73 2442 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 TREHO43280 583 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 KRT37O76014 449 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 CTDSPL2Q05D32 466 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 LAMC2Q13753 1193 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 RGS22Q8NE09 1264 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 PANK1Q8TE04 598 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 ATP6V0A1Q93050 837 aa19.21■□□□□ 0.67
HMGN1P19-201ENST00000436976 STXBP2Q15833 593 aa19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 USH1GQ495M9 461 aa19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 FRMD5Q7Z6J6 570 aa19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 TMEM105Q8N8V8 129 aa19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 SYTL5Q8TDW5 730 aaPredicted RBP19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 SUSD6Q92537 303 aa19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 ZNF689Q96CS4 500 aaPredicted RBP19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 C16orf70Q9BSU1 422 aa19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 NAPBQ9H115 298 aa19.2■□□□□ 0.66
HMGN1P19-201ENST00000436976 C17orf102A2RUQ5 167 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 FOXP2O15409 715 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 SORBS3O60504 671 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 ITGB1P05556 798 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 PDHBP11177 359 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 NRIP1P48552 1158 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 RBM10P98175 930 aaKnown RBP19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 HSDL1Q3SXM5 330 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 ADSSL1Q8N142 457 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 NSUN6Q8TEA1 469 aaKnown RBP19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 APBB2Q92870 758 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 TMEM47Q9BQJ4 181 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 PLVAPQ9BX97 442 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 NACAP1Q9BZK3 213 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 PNMA2Q9UL42 364 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 PCDHGC5Q9Y5F6 944 aa19.19■□□□□ 0.66
HMGN1P19-201ENST00000436976 SMARCA5O60264 1052 aaPredicted RBP19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 RANBP6O60518 1105 aaKnown RBP19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 PPFIA4O75335 1185 aa19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 MYSM1Q5VVJ2 828 aa19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 RBM23Q86U06 439 aaKnown RBP19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 SPPL3Q8TCT6 385 aa19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 P2RX5Q93086 422 aa19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 NKD2Q969F2 451 aaPredicted RBP19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 IWS1Q96ST2 819 aa19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 MRVI1Q9Y6F6 885 aa19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 FNDC1Q4ZHG4 1894 aaPredicted RBP19.18■□□□□ 0.66
HMGN1P19-201ENST00000436976 CFAP47Q6ZTR5 3102 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 CAND2O75155 1236 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 HMMRO75330 724 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 ZFYP08048 801 aaPredicted RBP19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 ATF7P17544 494 aaPredicted RBP19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 BTG3Q14201 252 aaPredicted RBP19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 TSHZ3Q63HK5 1081 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 PPP2R3CQ969Q6 453 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 RMDN3Q96TC7 470 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 CPVLQ9H3G5 476 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 RNPEPQ9H4A4 650 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 ACACBO00763 2458 aa19.17■□□□□ 0.66
HMGN1P19-201ENST00000436976 SMIM10L2AP0DMW4 78 aa19.16■□□□□ 0.66
HMGN1P19-201ENST00000436976 SMIM10L2BP0DMW5 78 aa19.16■□□□□ 0.66
HMGN1P19-201ENST00000436976 TOP1P11387 765 aaKnown RBP19.16■□□□□ 0.66
HMGN1P19-201ENST00000436976 EIF2AK2P19525 551 aaKnown RBP19.16■□□□□ 0.66
HMGN1P19-201ENST00000436976 ZNF543Q08ER8 600 aa19.16■□□□□ 0.66
HMGN1P19-201ENST00000436976 VN1R2Q8NFZ6 395 aa19.16■□□□□ 0.66
HMGN1P19-201ENST00000436976 ECHDC1Q9NTX5 307 aa19.16■□□□□ 0.66
HMGN1P19-201ENST00000436976 MRPL42Q9Y6G3 142 aaKnown RBP19.16■□□□□ 0.66
HMGN1P19-201ENST00000436976 SPTBN2O15020 2390 aa19.15■□□□□ 0.66
HMGN1P19-201ENST00000436976 EIF3JO75822 258 aaKnown RBP19.15■□□□□ 0.66
HMGN1P19-201ENST00000436976 DGKIO75912 1065 aa19.15■□□□□ 0.66
HMGN1P19-201ENST00000436976 FAM26DQ5JW98 314 aa19.15■□□□□ 0.66
HMGN1P19-201ENST00000436976 CELF3Q5SZQ8 465 aaKnown RBP19.15■□□□□ 0.66
HMGN1P19-201ENST00000436976 POF1BQ8WVV4 589 aa19.15■□□□□ 0.66
HMGN1P19-201ENST00000436976 SPATA33Q96N06 139 aa19.15■□□□□ 0.66
HMGN1P19-201ENST00000436976 NR3C2P08235 984 aa19.14■□□□□ 0.65
HMGN1P19-201ENST00000436976 SNHG28P0DPA3 235 aa19.14■□□□□ 0.65
HMGN1P19-201ENST00000436976 SP2Q02086 613 aa19.14■□□□□ 0.65
HMGN1P19-201ENST00000436976 KLHL23Q8NBE8 558 aa19.14■□□□□ 0.65
HMGN1P19-201ENST00000436976 ATP8B4Q8TF62 1192 aa19.14■□□□□ 0.65
HMGN1P19-201ENST00000436976 RMDN1Q96DB5 314 aa19.14■□□□□ 0.65
HMGN1P19-201ENST00000436976 H3BRB1 525 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms