RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 CDC37Q16543 378 aaPredicted RBP17.79■□□□□ 0.44
HLA-DQB2-231ENST00000435145 SMCR8Q8TEV9 937 aaPredicted RBP17.79■□□□□ 0.44
HLA-DQB2-231ENST00000435145 NUCKS1Q9H1E3 243 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB2-231ENST00000435145 MLXIPQ9HAP2 919 aa17.79■□□□□ 0.44
HLA-DQB2-231ENST00000435145 POTEB3A0JP26 581 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 POTECB2RU33 542 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 TRAF5O00463 557 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 AKR1B10O60218 316 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 AARSP49588 968 aaKnown RBP eCLIP17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 HDLBPQ00341 1268 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 SLFN13Q68D06 897 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 MCTP2Q6DN12 878 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 IQCEQ6IPM2 695 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 TATDN1Q6P1N9 297 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 POTEBQ6S5H4 581 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 PODNQ7Z5L7 613 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 GPBP1Q86WP2 473 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 SLFN12Q8IYM2 578 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 MMGT1Q8N4V1 131 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 ETNPPLQ8TBG4 499 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 SCFD1Q8WVM8 642 aa17.78■□□□□ 0.44
HLA-DQB2-231ENST00000435145 TBX3O15119 743 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 SLC1A4P43007 532 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 MMP14P50281 582 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 SLC12A3P55017 1021 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 MAP9Q49MG5 647 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 ARSHQ5FYA8 562 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 NLGN1Q8N2Q7 840 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 CCDC155Q8N6L0 562 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 P2RX7Q99572 595 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 DEF6Q9H4E7 631 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 FAM198AQ9UFP1 575 aa17.77■□□□□ 0.44
HLA-DQB2-231ENST00000435145 DDTLA6NHG4 134 aaPredicted RBP17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 N4BP1O75113 896 aaKnown RBP17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 MED24O75448 989 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 MOCS3O95396 460 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SHROOM1Q2M3G4 852 aaPredicted RBP17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 EDRF1Q3B7T1 1238 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CCDC40Q4G0X9 1142 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 PPP4R3CPQ6ZMV5 832 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SH3BP5LQ7L8J4 393 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FAM71BQ8TC56 605 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 RUBCNQ92622 972 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 MED4Q9NPJ6 270 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 JADE2Q9NQC1 790 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 PI4KBQ9UBF8 816 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ZNF646O15015 1829 aaPredicted RBP17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ATAD5Q96QE3 1844 aa17.77■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TLR2O60603 784 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 MAGEA1P43355 309 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 GYS2P54840 703 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CERKLQ49MI3 558 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 Q4G0T1 1027 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CACNA2D4Q7Z3S7 1137 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 GMCL1P1Q8NEA9 526 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CAGE1Q8TC20 777 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 LENG9Q96B70 501 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ACBD3Q9H3P7 528 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CALCOCO1Q9P1Z2 691 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 NPHP3-ACAD11A0A0J9YXS1 232 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TRIM37O94972 964 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SSBP05455 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TCP1P17987 556 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 PDE6BP35913 854 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FAM83BQ5T0W9 1011 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 RNF10Q8N5U6 811 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 GMCL1Q96IK5 515 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ALS2CR12Q96Q35 445 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TANGO6Q9C0B7 1094 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SALL4Q9UJQ4 1053 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FAM184BQ9ULE4 1060 aa17.76■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SERPING1P05155 500 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 STAT3P40763 770 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 HERC4Q5GLZ8 1057 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 HAUS3Q68CZ6 603 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CCNI2Q6ZMN8 369 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 COG1Q8WTW3 980 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 OSBPL9Q96SU4 736 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 KCNQ5Q9NR82 932 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 EMILIN3Q9NT22 766 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TBC1D7Q9P0N9 293 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 HYOU1Q9Y4L1 999 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 PCDHAC2Q9Y5I4 1007 aa17.75■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SREBF1P36956 1147 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CACNB3P54284 484 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 C2orf54Q08AI8 447 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SLC9C1Q4G0N8 1177 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 MUM1L1Q5H9M0 696 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 DACT2Q5SW24 774 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 STRIP1Q5VSL9 837 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SFMBT2Q5VUG0 894 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TMEM179Q6ZVK1 233 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 LSM14BQ9BX40 385 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 AMNQ9BXJ7 453 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms