RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 CTAGE4Q8IX94 777 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 ATRIPQ8WXE1 791 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 VCPKMTQ9H867 229 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 TRIM10Q9UDY6 481 aa13.45□□□□□ -0.26
CLDN4-203ENST00000435050 BACH1O14867 736 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 NDUFA10O95299 355 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 TUBB4AP04350 444 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 MAN2A1Q16706 1144 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 KIAA0895Q8NCT3 520 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 PVALEFA0A1B0GWK0 134 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 CCDC169A6NNP5 214 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 WNT10BO00744 389 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 RNASE9P60153 205 aaKnown RBP13.44□□□□□ -0.26
CLDN4-203ENST00000435050 PSMC6P62333 389 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 RASSF7Q02833 373 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 VWA3BQ502W6 1294 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 TTI2Q6NXR4 508 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 HAS1Q92839 578 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 WRNIP1Q96S55 665 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 KLRC4O43908 158 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 EPB41P11171 864 aaKnown RBP13.44□□□□□ -0.26
CLDN4-203ENST00000435050 MAGEA1P43355 309 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 CHMP4BP1P59074 171 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 FAM193AP78312 1265 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 ODR4Q5SWX8 454 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 REXO1L1PQ8IX06 675 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 FAM178BQ8IXR5 827 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 GOLGA1Q92805 767 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 MTMR9Q96QG7 549 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 ARMCX3Q9UH62 379 aaPredicted RBP13.44□□□□□ -0.26
CLDN4-203ENST00000435050 CNOT7Q9UIV1 285 aaKnown RBP13.44□□□□□ -0.26
CLDN4-203ENST00000435050 COL4A3BPQ9Y5P4 624 aa13.44□□□□□ -0.26
CLDN4-203ENST00000435050 M0R2N6 131 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 SNHG28P0DPA3 235 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 GMPSP49915 693 aaPredicted RBP13.43□□□□□ -0.26
CLDN4-203ENST00000435050 MTMR2Q13614 643 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 RRP1BQ14684 758 aaKnown RBP13.43□□□□□ -0.26
CLDN4-203ENST00000435050 ARHGEF16Q5VV41 709 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 STXBP4Q6ZWJ1 553 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 KRT26Q7Z3Y9 468 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 EIF2AK1Q9BQI3 630 aaKnown RBP13.43□□□□□ -0.26
CLDN4-203ENST00000435050 IFIH1Q9BYX4 1025 aaKnown RBP13.43□□□□□ -0.26
CLDN4-203ENST00000435050 SEMA6BQ9H3T3 888 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 FAM86B1E9PN63 330 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 FAM86B2P0C5J1 330 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 RPL13P26373 211 aaKnown RBP13.43□□□□□ -0.26
CLDN4-203ENST00000435050 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 ECM1Q16610 540 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 CAMKK2Q96RR4 588 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 ZHX2Q9Y6X8 837 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 MYH6P13533 1939 aa13.43□□□□□ -0.26
CLDN4-203ENST00000435050 IGKV6D-41A0A0C4DH26 115 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 MSH4O15457 936 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 BUB1O43683 1085 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 INPP5BP32019 993 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 KSR1Q8IVT5 923 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 GUF1Q8N442 669 aaKnown RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 CCDC94Q9BW85 323 aaPredicted RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 PLEKHA4Q9H4M7 779 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 CHD4Q14839 1912 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 RSPH10B2B2RC85 870 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 EXOC3O60645 756 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 TACC1O75410 805 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 RSPH10BP0C881 870 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 CAP2P40123 477 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 ORC2Q13416 577 aaPredicted RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 FAM160B2Q86V87 743 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 LRRN4CLQ8ND94 238 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 BICD1Q96G01 975 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 NHEJ1Q9H9Q4 299 aaPredicted RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 TMCO5BA8MYB1 307 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 MEIS2O14770 477 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 CALUO43852 315 aaPredicted RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 XRCC5P13010 732 aaKnown RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 LRRC15Q8TF66 581 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 ALS2CR12Q96Q35 445 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 DUSP9Q99956 384 aaKnown RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 TMOD4Q9NZQ9 345 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 ERVK-24P63145 666 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 KLHL30Q0D2K2 578 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 UTP14CQ5TAP6 766 aaKnown RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 ZKSCAN4Q969J2 545 aaPredicted RBP13.42□□□□□ -0.26
CLDN4-203ENST00000435050 GMCL1Q96IK5 515 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 REEP2Q9BRK0 252 aa13.42□□□□□ -0.26
CLDN4-203ENST00000435050 LRRC63Q05C16 580 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 MCTP2Q6DN12 878 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 FAM20AQ96MK3 541 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 PCIF1Q9H4Z3 704 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 PHLPP2Q6ZVD8 1323 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 SCN7AQ01118 1682 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 RNF225M0QZC1 329 aaPredicted RBP13.41□□□□□ -0.26
CLDN4-203ENST00000435050 ZBTB39O15060 712 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 EIF4A3P38919 411 aaKnown RBP13.41□□□□□ -0.26
CLDN4-203ENST00000435050 ZBED6P86452 979 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms