RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
LINC01090-202ENST00000434418 SNCAIPQ9Y6H5 919 aa12.25□□□□□ -0.45
LINC01090-202ENST00000434418 CCL15-CCL14A0A0B4J2E2 113 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 TRIM27P14373 513 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 TIMM10P62072 90 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 SOX4Q06945 474 aaPredicted RBP12.24□□□□□ -0.45
LINC01090-202ENST00000434418 NFIAQ12857 509 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 CCL15Q16663 113 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 TSNAXIP1Q2TAA8 658 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 CDC42EP5Q6NZY7 148 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 OTOP1Q7RTM1 612 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 FAM83AQ86UY5 434 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 FAM43AQ8N2R8 423 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 C2CD4AQ8NCU7 369 aaPredicted RBP12.24□□□□□ -0.45
LINC01090-202ENST00000434418 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 MRRFQ96E11 262 aaKnown RBP12.24□□□□□ -0.45
LINC01090-202ENST00000434418 RPAP1Q9BWH6 1393 aaPredicted RBP12.24□□□□□ -0.45
LINC01090-202ENST00000434418 MRIQ9BWK5 157 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 COPRSQ9NQ92 184 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 GNL3LQ9NVN8 582 aaKnown RBP12.24□□□□□ -0.45
LINC01090-202ENST00000434418 KIAA1522Q9P206 1035 aaPredicted RBP12.24□□□□□ -0.45
LINC01090-202ENST00000434418 PPP1R9AQ9ULJ8 1098 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
LINC01090-202ENST00000434418 AK9Q5TCS8 1911 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 MYH2Q9UKX2 1941 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 ZSWIM8A7E2V4 1837 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 RECKO95980 971 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 GNAI3P08754 354 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 GTF2A2P52657 109 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 CAP1Q01518 475 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 PTPN11Q06124 597 aaPredicted RBP12.23□□□□□ -0.45
LINC01090-202ENST00000434418 TFCP2Q12800 502 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 RASGRF1Q13972 1273 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 NKAPLQ5M9Q1 402 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 FKBP1CQ5VVH2 108 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 MYRFLQ96LU7 910 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 NOC4LQ9BVI4 516 aaKnown RBP12.23□□□□□ -0.45
LINC01090-202ENST00000434418 DENND2AQ9ULE3 1009 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 PCDHB5Q9Y5E4 795 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 PCDHGC5Q9Y5F6 944 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 ACTL7BQ9Y614 415 aa12.23□□□□□ -0.45
LINC01090-202ENST00000434418 SALL1Q9NSC2 1324 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 A0A1B0GUL7 405 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 TMPRSS2O15393 492 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 GAS2O43903 313 aaKnown RBP12.22□□□□□ -0.45
LINC01090-202ENST00000434418 SGO2Q562F6 1265 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 DCAF15Q66K64 600 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 ZFPM1Q8IX07 1006 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 TMEM87AQ8NBN3 555 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 FAM151AQ8WW52 585 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 GAL3ST3Q96A11 431 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 HOOK2Q96ED9 719 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 BCL11AQ9H165 835 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 USP40Q9NVE5 1235 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 CACNA2D2Q9NY47 1150 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 ABCF2Q9UG63 623 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 DOCK2Q92608 1830 aa12.22□□□□□ -0.45
LINC01090-202ENST00000434418 HTTP42858 3142 aa12.21□□□□□ -0.45
LINC01090-202ENST00000434418 PNMA6EA0A0J9YXQ4 647 aa12.21□□□□□ -0.45
LINC01090-202ENST00000434418 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.45
LINC01090-202ENST00000434418 SP3Q02447 781 aa12.21□□□□□ -0.45
LINC01090-202ENST00000434418 MTX1Q13505 466 aa12.21□□□□□ -0.45
LINC01090-202ENST00000434418 DYMQ7RTS9 669 aa12.21□□□□□ -0.45
LINC01090-202ENST00000434418 ERO1BQ86YB8 467 aa12.21□□□□□ -0.45
LINC01090-202ENST00000434418 DZIP1Q86YF9 867 aaKnown RBP12.21□□□□□ -0.45
LINC01090-202ENST00000434418 ZNF341Q9BYN7 854 aa12.21□□□□□ -0.45
LINC01090-202ENST00000434418 BTBD19C9JJ37 291 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 GNAI2P04899 355 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 CETPP11597 493 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 BMP3P12645 472 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC01090-202ENST00000434418 SEPT6Q14141 434 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 LRRC14Q15048 493 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 UVSSAQ2YD98 709 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 TMEM57Q8N5G2 664 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.2□□□□□ -0.46
LINC01090-202ENST00000434418 NEUROD6Q96NK8 337 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 CYP8B1Q9UNU6 501 aa12.2□□□□□ -0.46
LINC01090-202ENST00000434418 TFE3P19532 575 aaPredicted RBP12.19□□□□□ -0.46
LINC01090-202ENST00000434418 RGS3P49796 1198 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 PPIL2Q13356 520 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 CDPF1Q6NVV7 123 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.19□□□□□ -0.46
LINC01090-202ENST00000434418 AGMOQ6ZNB7 445 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 PRR23CQ6ZRP0 262 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 FAM20CQ8IXL6 584 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 ZGPATQ8N5A5 531 aaKnown RBP12.19□□□□□ -0.46
LINC01090-202ENST00000434418 PHC3Q8NDX5 983 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 FAM105AQ9NUU6 356 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 PTPN22Q9Y2R2 807 aa12.19□□□□□ -0.46
LINC01090-202ENST00000434418 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
LINC01090-202ENST00000434418 GAKO14976 1311 aa12.18□□□□□ -0.46
LINC01090-202ENST00000434418 DYRK3O43781 588 aa12.18□□□□□ -0.46
LINC01090-202ENST00000434418 BTDP43251 543 aa12.18□□□□□ -0.46
LINC01090-202ENST00000434418 PICALMQ13492 652 aa12.18□□□□□ -0.46
LINC01090-202ENST00000434418 MVPQ14764 893 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms