RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 MYOCDQ8IZQ8 938 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 RIC8AQ9NPQ8 531 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 MRFAP1Q9Y605 127 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 BICDL2A1A5D9 508 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 LRRC53A6NM62 1247 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 TULP2O00295 520 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 WDR59Q6PJI9 974 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 GOLGA6L1Q8N7Z2 621 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 SMCHD1A6NHR9 2005 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 A0A1B0GUL6 1792 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 TMEM150BA6NC51 233 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 PBX1P40424 430 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 LSM14BQ9BX40 385 aaKnown RBP17.22■□□□□ 0.35
SCARF1-203ENST00000434376 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 MTMR9Q96QG7 549 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 TSG101Q99816 390 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 TSPYL1Q9H0U9 437 aa17.22■□□□□ 0.35
SCARF1-203ENST00000434376 RXRBP28702 533 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 ADAM9Q13443 819 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 ZC2HC1CQ53FD0 456 aaPredicted RBP17.21■□□□□ 0.35
SCARF1-203ENST00000434376 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 SFR1Q86XK3 245 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 CTAGE15A4D2H0 777 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 TUBB4AP04350 444 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 CTAGE8P0CG41 777 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 CTAGE6Q86UF2 777 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 CTAGE4Q8IX94 777 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 DAGLBQ8NCG7 672 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 RABGGTAQ92696 567 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 AK8Q96MA6 479 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 PNKPQ96T60 521 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 ABCB6Q9NP58 842 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 SWAP70Q9UH65 585 aa17.21■□□□□ 0.35
SCARF1-203ENST00000434376 GOLGA6L9A6NEM1 432 aa17.21■□□□□ 0.34
SCARF1-203ENST00000434376 EGFRP00533 1210 aa17.21■□□□□ 0.34
SCARF1-203ENST00000434376 SLC7A5Q01650 507 aa17.21■□□□□ 0.34
SCARF1-203ENST00000434376 GJB7Q6PEY0 223 aa17.21■□□□□ 0.34
SCARF1-203ENST00000434376 CATSPER3Q86XQ3 398 aa17.21■□□□□ 0.34
SCARF1-203ENST00000434376 AKT1S1Q96B36 256 aa17.21■□□□□ 0.34
SCARF1-203ENST00000434376 PRR12Q9ULL5 1215 aa17.21■□□□□ 0.34
SCARF1-203ENST00000434376 MYBP10242 640 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 MYCLP12524 364 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-203ENST00000434376 HERVK_113P62684 666 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 FAM133AQ8N9E0 248 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 DHTKD1Q96HY7 919 aaPredicted RBP17.2■□□□□ 0.34
SCARF1-203ENST00000434376 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
SCARF1-203ENST00000434376 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 ALAS1P13196 640 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 NR2F2P24468 414 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 CYP2J2P51589 502 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 C2orf54Q08AI8 447 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 KIF5AQ12840 1032 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 DLK2Q6UY11 383 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 UNC13DQ70J99 1090 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 BANK1Q8NDB2 785 aa17.2■□□□□ 0.34
SCARF1-203ENST00000434376 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCARF1-203ENST00000434376 EML1O00423 815 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 ERLIN1O75477 346 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 EEF1GP26641 437 aaKnown RBP17.19■□□□□ 0.34
SCARF1-203ENST00000434376 POLD1P28340 1107 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 STRIP1Q5VSL9 837 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 LAD1O00515 517 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 MEIS2O14770 477 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 EIF3JO75822 258 aaKnown RBP17.19■□□□□ 0.34
SCARF1-203ENST00000434376 NMT1P30419 496 aaKnown RBP17.19■□□□□ 0.34
SCARF1-203ENST00000434376 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 NSMFQ6X4W1 530 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 ZDHHC15Q96MV8 337 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 KCND1Q9NSA2 647 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 EMILIN3Q9NT22 766 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 STK32BQ9NY57 414 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 ADAMTS1Q9UHI8 967 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 CDC23Q9UJX2 597 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 MYO6Q9UM54 1294 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 ASTN2O75129 1339 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-203ENST00000434376 ABCB11O95342 1321 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 ACTN2P35609 894 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 CYLC1P35663 651 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-203ENST00000434376 PRPHP41219 470 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 ARHGAP25P42331 645 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 FAM84AQ96KN4 292 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 MMS19Q96T76 1030 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 C7orf25Q9BPX7 421 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 PCIF1Q9H4Z3 704 aa17.19■□□□□ 0.34
SCARF1-203ENST00000434376 CTDP1Q9Y5B0 961 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-203ENST00000434376 RASSF10A6NK89 507 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 ONECUT3O60422 494 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-203ENST00000434376 PEX10O60683 326 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 FTCDO95954 541 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 DPEP1P16444 411 aa17.18■□□□□ 0.34
SCARF1-203ENST00000434376 USP8P40818 1118 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms