RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 COL2A1P02458 1487 aaPredicted RBP16.28■□□□□ 0.2
RFTN1-203ENST00000432519 IGLV3-22A0A075B6J6 115 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 RSPH10B2B2RC85 870 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 ZNF263O14978 683 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 ZBTB39O15060 712 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 RSPH10BP0C881 870 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 ZSCAN20P17040 1043 aaPredicted RBP16.28■□□□□ 0.2
RFTN1-203ENST00000432519 CXCL9Q07325 125 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 KRT26Q7Z3Y9 468 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 SMCR8Q8TEV9 937 aaPredicted RBP16.28■□□□□ 0.2
RFTN1-203ENST00000432519 PUF60Q9UHX1 559 aaKnown RBP16.28■□□□□ 0.2
RFTN1-203ENST00000432519 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
RFTN1-203ENST00000432519 KDM3AQ9Y4C1 1321 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 PPP1R2P41236 205 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 TEX35Q5T0J7 233 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 SLFN12Q8IYM2 578 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 PGAP2Q9UHJ9 254 aa16.28■□□□□ 0.2
RFTN1-203ENST00000432519 EFCAB8A8MWE9 144 aa16.27■□□□□ 0.2
RFTN1-203ENST00000432519 WNT10BO00744 389 aa16.27■□□□□ 0.2
RFTN1-203ENST00000432519 LRRC63Q05C16 580 aa16.27■□□□□ 0.2
RFTN1-203ENST00000432519 MOXD1Q6UVY6 613 aa16.27■□□□□ 0.2
RFTN1-203ENST00000432519 IKZF4Q9H2S9 585 aa16.27■□□□□ 0.2
RFTN1-203ENST00000432519 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
RFTN1-203ENST00000432519 ARHGEF10LQ9HCE6 1279 aa16.27■□□□□ 0.2
RFTN1-203ENST00000432519 TRAF5O00463 557 aa16.27■□□□□ 0.19
RFTN1-203ENST00000432519 ZBED6P86452 979 aa16.27■□□□□ 0.19
RFTN1-203ENST00000432519 KCNMA1Q12791 1236 aa16.27■□□□□ 0.19
RFTN1-203ENST00000432519 PSMD2Q13200 908 aa16.27■□□□□ 0.19
RFTN1-203ENST00000432519 RSRC2Q7L4I2 434 aaKnown RBP16.27■□□□□ 0.19
RFTN1-203ENST00000432519 MMRN2Q9H8L6 949 aa16.27■□□□□ 0.19
RFTN1-203ENST00000432519 ENC1O14682 589 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 CIITAP33076 1130 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 HOXD13P35453 343 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 GIT2Q14161 759 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
RFTN1-203ENST00000432519 REEP2Q9BRK0 252 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 KCTD10Q9H3F6 313 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 RPA1P27694 616 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 FKBP15Q5T1M5 1219 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 PIGOQ8TEQ8 1089 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 ARHGAP20Q9P2F6 1191 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
RFTN1-203ENST00000432519 FRMD3A2A2Y4 597 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 CHMP2AO43633 222 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 SEC31AO94979 1220 aaKnown RBP16.25■□□□□ 0.19
RFTN1-203ENST00000432519 FOSP01100 380 aaPredicted RBP16.25■□□□□ 0.19
RFTN1-203ENST00000432519 ZNF76P36508 570 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 CAP2P40123 477 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 CRACR2AQ9BSW2 395 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 RUSC1Q9BVN2 902 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 LRRC27Q9C0I9 530 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 BHMT2Q9H2M3 363 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 VCPKMTQ9H867 229 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 BMP2KQ9NSY1 1161 aaPredicted RBP16.25■□□□□ 0.19
RFTN1-203ENST00000432519 EMILIN3Q9NT22 766 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
RFTN1-203ENST00000432519 SFI1A8K8P3 1242 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 PIK3CDO00329 1044 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 KRT18P05783 430 aaKnown RBP16.25■□□□□ 0.19
RFTN1-203ENST00000432519 INPP5BP32019 993 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 KCNA1Q09470 495 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 CTTNQ14247 550 aaKnown RBP16.25■□□□□ 0.19
RFTN1-203ENST00000432519 CCDC65Q8IXS2 484 aa16.25■□□□□ 0.19
RFTN1-203ENST00000432519 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 FKBP3Q00688 224 aaKnown RBP16.24■□□□□ 0.19
RFTN1-203ENST00000432519 SFR1Q86XK3 245 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 EIF2AK1Q9BQI3 630 aaKnown RBP16.24■□□□□ 0.19
RFTN1-203ENST00000432519 NUP58Q9BVL2 599 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 GTPBP4Q9BZE4 634 aaKnown RBP16.24■□□□□ 0.19
RFTN1-203ENST00000432519 TANGO6Q9C0B7 1094 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 RANBP17Q9H2T7 1088 aaKnown RBP16.24■□□□□ 0.19
RFTN1-203ENST00000432519 GOPCQ9HD26 462 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 CDC23Q9UJX2 597 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 CTAGE9A4FU28 777 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 TBX3O15119 743 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 MYBP10242 640 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 TSR1Q2NL82 804 aaKnown RBP16.24■□□□□ 0.19
RFTN1-203ENST00000432519 HAUS3Q68CZ6 603 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 NIM1KQ8IY84 436 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 RETREG2Q8NC44 543 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 BAP1Q92560 729 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 WRAP73Q9P2S5 460 aaPredicted RBP16.24■□□□□ 0.19
RFTN1-203ENST00000432519 COL4A3BPQ9Y5P4 624 aa16.24■□□□□ 0.19
RFTN1-203ENST00000432519 LRRC53A6NM62 1247 aa16.23■□□□□ 0.19
RFTN1-203ENST00000432519 CYP3A4P08684 503 aa16.23■□□□□ 0.19
RFTN1-203ENST00000432519 FIGNQ5HY92 759 aa16.23■□□□□ 0.19
RFTN1-203ENST00000432519 CCDC122Q5T0U0 273 aa16.23■□□□□ 0.19
RFTN1-203ENST00000432519 SYT2Q8N9I0 419 aaPredicted RBP16.23■□□□□ 0.19
RFTN1-203ENST00000432519 ZBED3Q96IU2 234 aaPredicted RBP16.23■□□□□ 0.19
RFTN1-203ENST00000432519 FAM20AQ96MK3 541 aa16.23■□□□□ 0.19
RFTN1-203ENST00000432519 PLAGL2Q9UPG8 496 aa16.23■□□□□ 0.19
RFTN1-203ENST00000432519 DNM3Q9UQ16 869 aa16.23■□□□□ 0.19
RFTN1-203ENST00000432519 A0A1W2PQJ5 194 aa16.23■□□□□ 0.19
RFTN1-203ENST00000432519 AMPD2Q01433 879 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms