RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 RASSF7Q02833 373 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 CKAP4Q07065 602 aaKnown RBP12.59□□□□□ -0.39
CLDN4-202ENST00000431918 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
CLDN4-202ENST00000431918 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
CLDN4-202ENST00000431918 RPL13P26373 211 aaKnown RBP12.58□□□□□ -0.4
CLDN4-202ENST00000431918 PRPF4BQ13523 1007 aaKnown RBP12.58□□□□□ -0.4
CLDN4-202ENST00000431918 GLIS3Q8NEA6 775 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 CENPHQ9H3R5 247 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 MYH6P13533 1939 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 PVALEFA0A1B0GWK0 134 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 SFR1Q86XK3 245 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 C10orf67Q8IYJ2 551 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 LOC102724159A0A0B4J2E5 919 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 RNF225M0QZC1 329 aaPredicted RBP12.58□□□□□ -0.4
CLDN4-202ENST00000431918 TADA3O75528 432 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 SMARCA1P28370 1054 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 PDIA5Q14554 519 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 PWP2Q15269 919 aaKnown RBP12.58□□□□□ -0.4
CLDN4-202ENST00000431918 STXBP4Q6ZWJ1 553 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 GUF1Q8N442 669 aaKnown RBP12.58□□□□□ -0.4
CLDN4-202ENST00000431918 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 RASSF4Q9H2L5 321 aa12.58□□□□□ -0.4
CLDN4-202ENST00000431918 XRCC5P13010 732 aaKnown RBP12.57□□□□□ -0.4
CLDN4-202ENST00000431918 ASIC2Q16515 512 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 KIAA0895Q8NCT3 520 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 PNMA5Q96PV4 448 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 SH2D3AQ9BRG2 576 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 ST7Q9NRC1 585 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 NYAP2Q9P242 653 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 MRFAP1Q9Y605 127 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 FLOT1O75955 427 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 LRRC63Q05C16 580 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 TERF2Q15554 542 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 WDR78Q5VTH9 848 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 RABGGTAQ92696 567 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 SEMA6BQ9H3T3 888 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 L2HGDHQ9H9P8 463 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 FBXO28Q9NVF7 368 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
CLDN4-202ENST00000431918 COL4A1P02462 1669 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
CLDN4-202ENST00000431918 KLRC4O43908 158 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 MOCS3O95396 460 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 LMAN1P49257 510 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 DACT2Q5SW24 774 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 ZNF577Q9BSK1 485 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 FAM198AQ9UFP1 575 aa12.57□□□□□ -0.4
CLDN4-202ENST00000431918 PLEKP08567 350 aaPredicted RBP12.56□□□□□ -0.4
CLDN4-202ENST00000431918 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLDN4-202ENST00000431918 KIF11P52732 1056 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 MAP9Q49MG5 647 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 FAM178BQ8IXR5 827 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 CYP2W1Q8TAV3 490 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 DUSP9Q99956 384 aaKnown RBP12.56□□□□□ -0.4
CLDN4-202ENST00000431918 BLOC1S4Q9NUP1 217 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 DDX41Q9UJV9 622 aaKnown RBP12.56□□□□□ -0.4
CLDN4-202ENST00000431918 CAPN11Q9UMQ6 739 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 PSMD14O00487 310 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 TMEM139Q8IV31 216 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 FAM133AQ8N9E0 248 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 RETREG2Q8NC44 543 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 BANK1Q8NDB2 785 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
CLDN4-202ENST00000431918 EXOC3O60645 756 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 PPP1R11O60927 126 aaPredicted RBP12.56□□□□□ -0.4
CLDN4-202ENST00000431918 ABL1P00519 1130 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 BAG6P46379 1132 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 MAP3K9P80192 1104 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 ODR4Q5SWX8 454 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 ZFYVE27Q5T4F4 411 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
CLDN4-202ENST00000431918 TSGA10Q9BZW7 698 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 MLXIPQ9HAP2 919 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 VPS18Q9P253 973 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 ITIH6Q6UXX5 1313 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 KRT13P13646 458 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 GABPAQ06546 454 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 HLTFQ14527 1009 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLDN4-202ENST00000431918 ARHGAP44Q17R89 818 aa12.56□□□□□ -0.4
CLDN4-202ENST00000431918 A0A1W2PQC6 194 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 CCDC169A6NNP5 214 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 PNMA6AP0CW24 399 aaPredicted RBP12.55□□□□□ -0.4
CLDN4-202ENST00000431918 OAS2P29728 719 aaKnown RBP12.55□□□□□ -0.4
CLDN4-202ENST00000431918 PSMD2Q13200 908 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 WHAMMP3Q1A5X7 153 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 MIER3Q7Z3K6 550 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 TBC1D5Q92609 795 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 SERPINA10Q9UK55 444 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 FRMD4BQ9Y2L6 1034 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 MED24O75448 989 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 USP11P51784 963 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms